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. 2011 Apr 8;6(4):e18570. doi: 10.1371/journal.pone.0018570

Table 2. A comparative analysis of subunit structure of Mtb BfrB with representative ferritins from archaea, eubacteria and eukarya using the DaliLite -pairwise option vs 3.1.

Organism (ferritin annotation) PDB-Chain Z score RMSD (Å) Naligned Total N Identity (%) Solvation Energy (kcal/mol) Reference
Eubacteria ferritins
M. tuberculosis BfrB_A - - - 181 −3956.8 This study
C. jejuni 1krq_A 22.9 1.1 156 164 24 −3651.4 Unpublished
H. pylori 3bve_A 22.4 1.2 157 173 19 −3343.4 [18]
E. coli 1eum_A 22.4 1.3 154 161 19 −4140.6 [15]
Archaebacteria ferritins
P. furiosus 2jd6_O 22.4 1.8 156 167 27 −3855.4 [16]
A. fulgidus 1s3q_J 22.1 1.6 157 164 27 −4576.6 [17]
T. maritima 1vlg_A 22.0 1.7 157 164 24 −4473.6 Unpublished
Eukaryotic ferritins
Human H -chain 2cei_A 20.8 1.2 151 172 25 −3798.2 [7]
Insect H-chain 1z6o_M 19.1 1.5 151 191 27 −3528.0 [14]
Insect L-chain 1z6o_A 17.7 1.7 150 212 17 −3642.5 [14]
Horse spleen 1ies_A 20.6 1.2 152 174 18 −2991.4 [11]
Mouse L-chain 1h96_A 20.5 1.2 151 166 19 −3062.5 [74]
Bullfrog L ferritin 1rcc_A 20.0 1.8 155 171 23 −2435.0 [9]
Human Mitochondria 1r03_A 20.7 1.2 151 170 25 −4213.3 [75]
Bullfrog M ferritin 1mfr_A 20.3 1.6 154 171 25 −3999.9 [8]
Soybean 3a68_A 20.2 1.2 153 194 28 −4673.3 [13]
Mycobacterial heme-containing bacterioferritins (Bfrs)
M. tuberculosis (BfrA) 2wtl_A 17.0 2.3 148 161 20 −5109.5 [38]
M. smegmatis (Bfr) 3bkn_A 17.2 2.2 148 161 20 −4388.7 [76]
Mycobacterial DNA binding proteins from starved cells (Dps)
M. smegmatis (Dps1) 1vei_A 13.0 2.4 131 175 11 −4189.0 [58]
M. smegmatis (Dps2) 2z90_A 12.7 2.4 130 161 12 −3964.8 [77]