Table 1.
Breast cancer cohorts
GEO Accession No. | Sample Size |
---|---|
GSE3494 [21] | 251† |
GSE4922 [1] | 289† |
GSE2990 [22] | 189 |
GSE1456 [23] | 159 |
GSE7390 [24] | 198 |
GSE11121 [25] | 200 |
GSE12093 [26] | 136 |
GSE2603 [27] | 121‡ |
GSE5327 [28] | 58 |
GSE2034 [29] | 286 |
GEO Breast cancer cohorts containing 1887 samples were reduced to generate the 1614 sample dataset. † 248 overlapping between these cohorts were removed to retain unique samples. ‡ 22 cell lines were removed from this cohort keeping patient samples only