Table 4.
Homologs for DNA helicases in different model organisms
| S. no. | Human | Rice* | Arabidopsis | Yeast | P. falciparum‡ |
| 1 | RECQ1 | RECQ4A (LOC_Os11g48090) | RH20 (Q9C718) | SGS1 (P35187) | DNA helicase (PF14_0278) |
| 2 | BLM | RECQ4B (LOC_Os04g35420) | RH20 (Q9C718) | SGS1 (P35187) | DNA helicase (PFI0910w) |
| 3 | WRN | RecQSim (LOC_Os05g05810) | RH41 (Q3EBD3) | SGS1 (P35187) | DNA helicase (PF14_0278) |
| 4 | RECQ4 | RH40 (LOC_Os04g40970) | RH30 (Q8W4R3) | SGS1 (P35187) | DNA helicase (PF14_0278) |
| 5 | RECQ5 | RecQl3 (LOC_Os02g54020) | RH14 (Q8H136) | SGS1 (P35187) | DNA helicase (PFI0910w) |
| 6 | KU70 | ku80 (LOC_Os07g08729) | ARP (P45951) | KU70 (P32807) | n/f |
| 7 | MCM2 | MCM2 (LOC_Os11g29380) | MCM3 (Q9FL33) | MCM2 (P29469) | MCM2 (PF14_0177) |
| 8 | MCM3 | MCM3 (LOC_Os05g39850) | MCM3 (Q9FL33) | MCM3 (P24279) | MCM3 (PFE1345c) |
| 9 | MCM4 | MCM4 (LOC_Os01g36390) | PROL (P43299) | CDC54 (P30665) | MCM4-related (PF13_0095) |
| 10 | MCM5 | MCM5 (LOC_Os02g55410) | MCM3 (Q9FL33) | MCM5 (P29496) | MCM5 (PFL0580w) |
| 11 | MCM6 | MCM6 (LOC_Os05g14590) | PROL (P43299) | MCM6 (P53091) | Replication licensing factor (PF13_0291) |
| 12 | MCM7 | MCM7 (LOC_Os12g37400) | PROL (P43299) | CDC47 (P38132) | MCM7 (PF07_0023) |
| 13 | MCM8 | MCM8 (LOC_Os05g38850) | PROL (P43299) | MCM6 (P53091) | MCM protein (PFL0560c) |
| 14 | MCM9 | MCM9 (LOC_Os06g11500) | MCM3 (Q9FL33) | CDC54 (P30665) | Replication licensing factor (PF13_0291) |
| 15 | MCM10 | MCM10 (LOC_Os09g36820) | MCM10 (Q5XVE2) | MCM10 (P32354) | conserved Plasmodium protein (PF11_0207) |
| 16 | NCL | NCL (LOC_Os04g52960) | AT1G48920# | PUB1 (P32588) | RNA binding protein (PFI1175c) |
| 17 | CHD2 | SNF2 (LOC_Os07g46590) | PKL (Q9S775) | CHD1 (P32657) | CHD1 (PF10_0232) |
| 18 | ERCC3 | XPB2 (LOC_Os01g49680) | XPB2 (Q9FUG4) | RAD25 (Q00578) | DNA repair helicase rad25 (PF10_0369) |
| 19 | ERCC2 | UVH6 (LOC_Os05g05260) | UVH6 (Q8W4M7) | RAD3 (P06839) | DNA excision-repair helicase (PFI1650w) |
| 20 | CHD7 | CHD3 (LOC_Os06g08480) | ISW2 (Q8RWY3) | ISW2 (Q08773) | CHD1 (PF10_0232) |
| 21 | HELLS | SNF2 (LOC_Os03g22900) | BRM (Q6EVK6) | P43610 | DEAD/DEAH box helicase (PFB0730w) |
| 22 | INOC1 | SNF2 (LOC_Os03g22900) | INO80 (Q8RXS6) | INO80 (P53115) | ATP-dependent helicase (PF08_0048) |
| 23 | RuvB-like 1 | ruvB-like (LOC_Os07g08170) | AT5G67630# | RUVBL1 (Q03940) | RuvB DNA helicase (PF11_0071) |
| 24 | RuvB-like 2 | ruvB-like 2 (LOC_Os06g08770) | AT3G49830# | RUVBL2 (Q12464) | DNA helicase (PF13_0330) |
| 25 | PIF1 | n/f | PIF1 (AT 3G51690#) | PIF1 (P07271) | n/f |
| 26 | Twinkle | n/f | n/f | n/f | n/f |
| 27 | BACH1 | helicase (LOC_Os09g37920) | UVH6 (Q8W4M7) | CHL1 (P22516) | DNA repair helicase (PF14_0081) |
| 28 | RecQ5 alpha | DEAD-box (LOC_Os02g54020) | AT4G35740# | SGS1 (P35187) | DNA helicase (PFI0910w) |
| 29 | RecQ5 beta | DEAD-box (LOC_Os02g54020) | AT4G35740# | SGS1 (P35187) | DNA helicase (PFI0910w) |
| 30 | RecQ5 gamma | DEAD-box (LOC_Os02g54020) | AT4G35740# | SGS1 (P35187) | DNA helicase (PFI0910w) |
| 31 | RTEL1 | helicase (LOC_Os01g40980) | UVH6 (Q8W4M7) | RAD3 (P06839) | DNA repair helicase (PF14_0081) |
Swiss-Prot Ids are given in brackets. n/f, not found.
*
Locus Ids are indicated in brackets for rice homologs (Rice Genome Annotation Project; rice.plantbiology.msu.edu).
‡
Gene Ids are indicated in brackets for P. falciparum homologs (PlasmoDB: Malaria Parasite Genome Project; plasmodb.org/plasmo). #TA IR Locus Ids (www.arabidopsis.org).