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. 2010 Jul-Aug;1(4):260–272. doi: 10.4161/viru.1.4.12318

Table 1.

Strains and plasmids used in this study

Strains and plasmids Descriptions Sources
E. coli
S17-1λpir thi pro hsdR hsdM+ recA RP4-2-Tc::Mu-Km::Tn7 λpir 57
S17_pDM4_exsC1 + 2 S17 carrying pDM4_exsC1 + 2 This study
S17_pMMB207_exsC S17 carrying pMMB207_exsC This study
S17_pMMB207_bla S17 carrying pMMB207_bla This study
S17_ pDM4_exsA_HA_Insertion S17 carrying pDM4_exsA_HA_Insertion This study
S17_ pDM31_Ptac_exsC S17 carrying pDM31_Ptac_exsC_His This study
S17_ pMMB207_exsD_HA S17 carrying pMMB207_exsD_HA This study
S17_ pMMB207_exsA_HA S17 carrying pMMB207_exsA_HA This study
S17_ pGST_exsC_His S17 carrying pRY107_GST_exsC_His This study
S17_ pGST_ exsC_Δ5′-His S17 carrying pRY107_GST_exsC_Δ5′-His This study
S17_ pDM4_exsA_HA_Insertion S17 carrying pDM4_exsA_HA_Insertion This study
V. parahaemolyticus
NY-4 Clinical isolate O3:K6 47
ΔexsC exsC (vp1701) deletion mutant This study
ΔexsD exsC exsC and exsD double deletion mutant This study
ΔexsD exsD deletion mutant 47
ΔexsC_pMMB207_exsC ΔexsC strain with pMMB207_exsC This study
NY-4_pMMB207_exsC NY-4 with pMMB207_ exsC This study
ΔexsC_pMMB207_bla ΔexsC strain with pMMB207_ bla This study
NY-4_pMMB207_bla NY-4 with pMMB207_ bla This study
NY-4:pexsA NY-4 strain with pMMB207_ exsA 47
NY-4:pexsD-HA pexsC-His NY-4 with pDM31_Ptac_exsC_His and pMMB207_exsD_HA This study
NY-4:pexsD-HA NY-4 with pMMB207_exsD_HA This study
NY-4:pexsD-HA-pexsA-His NY-4 with pDM31_Ptac_exsA_His and pMMB207_exsD_HA This study
NY-4:pGST-exsC-His pexsD-HA NY-4 with pRY107_GST_exsC_His and pMMB207_exsD_HA This study
NY-4:pGST-exsC-His pexsA-HA NY-4 with pRY107_GST_exsC_His and pMMB207_exsA_HA This study
NY-4:pGST_ exsC_Δ5′-His pexsD-HA NY-4 with pRY107_GST_ exsC_Δ5′-His and pMMB207_exsD_HA This study
NY-4:pGST-exsC(7-148)-His pexsD-HA NY-4 with pRY107_GST_exsC(7-148)-His and pMMB207_exsD_HA This study
NY-4:pGST-exsC(13-148)-His pexsD-HA NY-4 with pRY107_GST_exsC(13-148)-His and pMMB207_exsD_HA This study
NY-4:pGST-exsC(27-148)-His pexsD-HA NY-4 with pRY107_GST_exsC(27-148)-His and pMMB207_exsD_HA This study
NY-4_pDM4_exsA_HA_Insertion NY-4 with HA tagged exsA in the chromosome This study
ΔexsC_pDM4_exsA_HA_Insertion ΔexsC with HA tagged exsA in the chromosome This study
Plasmids
pDM4 A suicide vector with ori R6K sacB; Cmr 58
pMMB207 RSF1010 derivative, IncQ lacIq Cmr Ptac oriT 59
pDM31 TcR; p15A origin, pACYC184 derivative that lacks cmr and includes mob 54
pRY107 KmR, pWSK29 MCS oriT mob+ 56
pDM4_exsC1 + 2 Flanking region sequences of exsC cloned into pDM4 This study
pMMB207_exsC exsC coding sequences with sequences for 6 His amino acids at the C-terminus cloned into pMMB207 This study
pMMB207_bla Partial blaTEM-1 cloned into pMMB207 This study
pDM31_Ptac_exsC_His exsC coding sequence with sequence for 6 His amino acids at the C-terminus and Ptac promoter sequence at the N-terminus cloned into pDM31 This study
pMMB207_exsD_HA exsD sequence with HA sequence at the C-terminus cloned into pMMB207 This study
pMMB207_exsA_HA exsA sequence with HA sequence at the C-terminus cloned into pMMB207 This study
pDM31_Ptac_exsA_His exsA sequence with sequence for 6 His amino acids at the C-terminus and Ptac promoter sequence at the N-terminus cloned into pDM31 This study
pRY107_GST_exsC_His exsC sequence with GST sequence at the N-terminus and 6 His sequence at the C-terminus cloned into pRY107 This study
pRY107_GST_ exsC_Δ5′-His N terminal 102 bp truncated exsC sequence with GST sequence at the N-terminus and 6 His sequence at the C-terminus cloned into pRY107 This study
pRY107_GST_exsC(7-148)-His N terminal 18 bp truncated exsC sequence with GST sequence at the N-terminus and 6 His sequence at the C-terminus cloned into pRY107 This study
pRY107_GST_exsC(13-148)-His N terminal 36 bp truncated exsC sequence with GST sequence at the N-terminus and 6 His sequence at the C-terminus cloned into pRY107 This study
pRY107_GST_exsC(27-148)-His N terminal 78 bp truncated exsC sequences with GST sequence at the N-terminus and 6 His sequence at the C-terminus cloned into pRY107 This study
pDM4_exsA_HA_Insertion exsA with HA sequence at the C-terminus cloned into pDM4 This study