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. Author manuscript; available in PMC: 2011 Apr 11.
Published in final edited form as: Methods Mol Biol. 2010;604:319–331. doi: 10.1007/978-1-60761-444-9_22

Table 1.

A list of software supporting mzML at the time of this writing. An updated list is available at the mzML web site.

Author Product mzML support
CSHS ProteoWizard Full mzML support available today
http://proteowizard.sourceforge.net/
ISB TPP Full mzML support available today
http://tools.proteomecenter.org/
ISB RAMP, JRAP Full mzML support available today
http://tools.proteomecenter.org/
Insilicos Insilicos Viewer Full mzML support available today
http://www.insilicos.com/viewer_download.html
GeneBio Phenyx Full mzML support available today
http://www.phenyx-ms.com/
Vanderbilt MyriMatch Full mzML support available today
http://fenchurch.mc.vanderbilt.edu/lab/software.php
Thermo Scientific RAW->mzML conv beta
Applied Biosystems WIFF->mzML conv beta
NCBI NCBI C++ toolkit beta
http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/
Univ. of Lund Proteios Full mzML support available today
http://www.proteios.org/
SIB InSilicoSpectro Full mzML support available today
http://insilicospectro.vital-it.ch/