Table 2. Summary of genes with significant change in small RNA and mRNA abundance.
Fold-change (FC) and posterior probability ratios (P) for six genes whose small RNA abundance differs by at least 3-fold and mRNA abundance differs by at least 2-fold in L4 and adult animals [ego-1(om84) fem-1(hc17) vs fem-1(hc17)]. Calculations for fold-change and P-ratios are found in Methods.
L4 | ADULT | ||||||||
---|---|---|---|---|---|---|---|---|---|
sRNA | mRNA | sRNA | mRNA | ||||||
FC | P | FC | P | FC | P | FC | P | ||
mes-6 | Polycomb-like | 0.15–0.17 | <10−15 | 2.18–2.46 | <10−15–10−3 | 0.01–0.04 | <10−15–10−6 | 2.14–4.16 | <10−15 |
F01G4.4 | Unknown function | 0.03–0.14 | <10−15 | 3.27–5.31 | <10−15 | 0.01–0.06 | <10−15 | 2.81–3.15 | <10−15 |
csr-1 | Argonaute | 0.02–0.04 | <10−15 | 2.09–2.73 | <10−15 | 0.002–0.02 | <10−15 | 2.56–5.61 | <10−15 |
klp-7 | Kinesin | 0.03–0.14 | <10−15 | 3.11–4.35 | <10−15 | 0.01–0.09 | <10−15 | 6.12–8.27 | <10−15 |
T12E12.2 | Heterchromatin-assoc. protein HP1 | 0.07–0.08 | <10−15 | 2.26–4.33 | <10−15–10−3 | 0.02–0.17 | <10−15 | 2.64–2.97 | <10−15 |
T12E12.3 | Unknown function | 0.12–0.15 | <10−15 | 2.94–6.29 | <10−15 | 0.01–0.10 | <10−15 | 5.38–9.90 | <10−15 |