Table 1.
PCR Assay | copy no. | Variability* CT | R2 ** | PCR Efficiency (%) ** | |
---|---|---|---|---|---|
intra-assay | inter-assay | ||||
OPV 12/13 | 106 | 17.58 ± 0.23 | 17.42 ± 0.20 | 0.99 | 96.00 |
105 | 20.33 ± 0.16 | 20.55 ± 0.20 | |||
104 | 24.13 ± 0.15 | 24.34 ± 0.21 | |||
103 | 27.01 ± 0.08 | 27.42 ± 0.41 | |||
102 | 31.22 ± 0.08 | 31.24 ± 0.38 | |||
101 | 34.42 ± 0.05 | 34.96 ± 0.47 | |||
c-myc | 106 | 19.63 ± 0.04 | 19.74 ± 0.46 | 0.99 | 97.62 |
105 | 23.23 ± 0.28 | 23.09 ± 0.31 | |||
104 | 26.40 ± 0.05 | 26.61 ± 0.29 | |||
103 | 29.53 ± 0.02 | 29.65 ± 0.55 | |||
102 | 34.73 ± 0.49 | 33.76 ± 0.97 | |||
101 | 36.74 ± 0.36 | 36.39 ± 0.58 |
* for the determination of the intra-assay variability, plasmid standards (106-101 plasmid copies) were measured in triplicate, and for the inter-assay variability, measurements were repeated on 3 consecutive days; ** calculation using the slope of the calibration curves for plasmid standards (101-106 plasmid copies); The linear detection range is 106-101 copies per run. CT threshold cycle