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. 2011 Jan 27;300(4):G627–G636. doi: 10.1152/ajpgi.00563.2010

Table 1.

Primers used for cloning of SERT promoter constructs

Primer Sequence
hSERTp1
    hSERTp1 (−872/+2) 5′-CGGGGTACCACTCCCGGGCTCAGCTGATCCTCCAC-3′
    hSERTp1A (−672/+2) 5′-CGGGGTACCAGCTTTGAACTGTAGCTGGTTAACAA-3′
    hSERTp1B (−472/+2) 5′-CGGGGTACCCGGGATGGGGACGATGGGGAGGTGTC-3′
    hSERTp1C (−272/+2) 5′-CGGGGTACCGCTCCTCCCTGCGAGCGTGTGTGTGT-3′
    Reverse primer 5′-CCCAAGCTTTTGTGCGGAGGGGCGCCGG-3′
hSERTp2
    hSERTp2 (1995/+123) 5′-CGGGGTACCATAGGCCGGAGGGAAGTACAGAGG-3′
    hSERTp2A (−738/+123) 5′-CGGGGTACCGGTGAGCAGCAGTGCCGTTTAAGG-3′
    hSERTp2B (−152/+123) 5′-CGGGGTACCGGACTGCCATGTAGCAAATAGG-3′
    Reverse primer 5′-CCCAAGCTTTCCTGCTGGTTAGTAAATGACA-3′

The two alternate promoters of serotonin transporter (SERT) gene, upstream of exon 1a-(referred here as hSERTp1) and upstream of exon 2 and extending upstream of exon 1c (referred here as hSERTp2) were cloned by PCR utilizing gene-specific primers. For both hSERTp1 and hSERTp2, the forward primers were designed to contain an internal site for the KpnI restriction enzyme (underlined) and the reverse primers contained a site for the HindIII enzyme (underlined).