Table 1.
Primer Sequence | |
---|---|
hSERTp1 | |
hSERTp1 (−872/+2) | 5′-CGGGGTACCACTCCCGGGCTCAGCTGATCCTCCAC-3′ |
hSERTp1A (−672/+2) | 5′-CGGGGTACCAGCTTTGAACTGTAGCTGGTTAACAA-3′ |
hSERTp1B (−472/+2) | 5′-CGGGGTACCCGGGATGGGGACGATGGGGAGGTGTC-3′ |
hSERTp1C (−272/+2) | 5′-CGGGGTACCGCTCCTCCCTGCGAGCGTGTGTGTGT-3′ |
Reverse primer | 5′-CCCAAGCTTTTGTGCGGAGGGGCGCCGG-3′ |
hSERTp2 | |
hSERTp2 (1995/+123) | 5′-CGGGGTACCATAGGCCGGAGGGAAGTACAGAGG-3′ |
hSERTp2A (−738/+123) | 5′-CGGGGTACCGGTGAGCAGCAGTGCCGTTTAAGG-3′ |
hSERTp2B (−152/+123) | 5′-CGGGGTACCGGACTGCCATGTAGCAAATAGG-3′ |
Reverse primer | 5′-CCCAAGCTTTCCTGCTGGTTAGTAAATGACA-3′ |
The two alternate promoters of serotonin transporter (SERT) gene, upstream of exon 1a-(referred here as hSERTp1) and upstream of exon 2 and extending upstream of exon 1c (referred here as hSERTp2) were cloned by PCR utilizing gene-specific primers. For both hSERTp1 and hSERTp2, the forward primers were designed to contain an internal site for the KpnI restriction enzyme (underlined) and the reverse primers contained a site for the HindIII enzyme (underlined).