Table 2.
tRNase ZL Processing Kinetics with Wild Type tRNAIle and Pathogenesis-Associated T Stem Mutant Substrates
| tRNAIle | kcata | KMb | kcat/KMc | kcat Re WT | KM Re WT |
kcat/KM Re WTd |
|---|---|---|---|---|---|---|
| WT | 1.6± 0.17 | 1.3± 0.31 | 1.7± 0.5 | N/A | N/A | N/A |
| m.4308G>A | 0.24± 0.01 | 0.79± 0.05 | 0.31± 0.003 | 0.15± 0.03 | 0.77± 0.06 | 0.19± 0.02 |
| m.4309G>A | 0.48± 0.06 | 1.3± 0.25 | 0.43± 0.14 | 0.32± 0.04 | 1.21± 0.43 | 0.31± 0.06 |
min−1
X 10−8 M
X 108 M/min
Re WT (n-fold reduction re wild type) refers to the ratio of processing efficiencies: the mean kcat/KM (Mutant) / kcat/KM (WT) obtained in parallel kinetic experiments.
Averages of two or three Michaelis-Menten experiments with each variant are presented; wild type and variant experiments were performed the same day. +/− indicates standard error. Columns 1–7 are identified in the second row. Relative kcat/KM for the variants in column 7 is the n-fold reduction relative to wild type.