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. 2003 Dec 8;100(26):15324–15328. doi: 10.1073/pnas.0306899100

Table 3. Comparison of the three approaches using S = (V, H), ε = 2.


Rejection*
Estimated likelihood
No likelihood
Acceptance rate 0.0008% 16.9% 0.2%
TMRCA T
1st quartile 0.51 0.50 0.54
    Mean 0.69 0.67 0.70
    Median 0.64 0.63 0.66
    3rd quartile 0.81 0.80 0.81
Mutation rate θ
    1st quartile 0.024 0.025 0.024
    Mean 0.029 0.031 0.029
    Median 0.028 0.030 0.028
    3rd quartile 0.033 0.035 0.033
*

Algorithm D; based on 1,000 observations. Estimated SEM of T = 0.01.

Based on likelihoods estimated from B = 200 simulations; 1,000 observations after sampling every 100 steps. Estimated SEM of T = 0.01.

Algorithm F; based on 1,000 observations after sampling every 50,000 steps. Estimated SEM of T = 0.01.