Table 1. Results of rosetta fold prediction and filtering with unassigned NMR data.
Protein
|
NMR data
|
Ranking of rosetta models using NMR data
|
||||||
---|---|---|---|---|---|---|---|---|
PDB ID code | Fold type | No. of residues | CS | NOE | RDC | Correlation coefficient* | Best-scoring cluster rmsd, ņ | Correctly assigned backbone atoms, %‡ |
1b4c | α | 92 | 472 | 830 | 218 | -0.73 | 4.58 | 3.1 |
1cmz | α | 128 | 1,042 | 1,221 | 104 | -0.72 | 6.67 | 1.4 |
1gbl | αβ | 56 | 471 | 612 | 283 | -0.90 | 4.46 | 6.6 |
1ghh | αβ | 81 | 771 | 760 | 530 | -0.86 | 4.81 | 10.9 |
1khm | αβ | 88 | 735 | 1,128 | 206 | -0.87 | 4.45 | 4.1 |
1ubi | αβ | 76 | 803 | 1,240 | 628 | -0.91 | 3.43 | 13.5 |
2ezm | β | 101 | 767 | 1,005 | 327 | -0.81 | 6.23 | 3.2 |
2ezxA | α | 89 | 808 | 729 | 245 | -0.85 | 6.29 | 2.7 |
Correlation coefficient between the rmsd of the nine protein models to the native structure and the average score of the top five assignments for each of the models
rmsd of the best-scoring cluster to the native structure.
Average percentage of correctly assigned backbone atoms for the best-scoring cluster center.