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. Author manuscript; available in PMC: 2012 May 1.
Published in final edited form as: Proteins. 2011 Mar 1;79(5):1573–1588. doi: 10.1002/prot.22984

FIGURE 2.

FIGURE 2

Potential of mean force for opening of the N-SH2 domain from the PTP domain. A) Free energy (kcal/mol) as a function of distance (RCOM, Å) between the center of mass the PTP and N-SH2 domains as calculated from the last 500ps of sampling in each window. B) Expanded view of the minima in the PMF for all 4 systems.