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. 2011 Mar 17;32(8):963–971. doi: 10.1093/eurheartj/ehr091

Table 3.

Plasma levels of CXCL12 vary by single-nucleotide polymorphisms from genome-wide association studies of coronary artery disease/myocardial infarction in PennCath and PennCAC

SNP (study, RAF) Published risk allele, OR for CAD/MI (P-value) Plasma CXCL12 levels by number of risk alleles in PennCath Plasma CXCL12 levels by number of risk alleles in PennCAC
rs501120 (WTCCC, 0.87; PennCath, 0.87; PennCAC, 0.86) T, 1.33 (10−8)a TTï (n = 874) 2.34 ± 0.49 TT (n = 993) 2.52 ± 0.57
TCï (n = 271) 2.28 ± 0.46 TC (n = 345) 2.49 ± 0.54
CCï (n = 28) 2.23 ± 0.53 CC (n = 35) 2.41 ± 0.46

rs1746048b (MIGEN, 0.86; PennCath, 0.87; PennCAC, 0.86) C, 1.17 (10−9)c CC (n = 874) 2.33 ± 0.49 N/A
CT (n = 276) 2.27 ± 0.46 N/A
TT (n = 27) 2.21 ± 0.52 N/A

RAF, risk allele frequency.

aData derived from Wellcome Trust Case Control Consortium and German MI Study.1,2

bBased on quantitative trait means for rs1632484, which has r2 = 0.98 in PennCath and r2 = 1.0 in HapMap with rs1746048. The allelic dosage effects are based upon rs1632484 because it was directly genotyped in PennCath, whereas rs501120 was imputed.

cData derived from Myocardial Infarction Genetics Consortium Study.3

ïP for trend = 0.038.

P for trend = 0.005.

P for trend = 0.036.