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. 2010 Mar 29;1(2):158–165.

Table 3.

Genotype and allele frequencies among boys and girls

Boys Girls



Frequency % Frequency % Frequency %
Gene Subjects without DD Subjects with DD Subjects without DD Subjects with DD Subjects without DD Subjects with DD
COL9A3 rs61734651
 CC 79.9 86.4 80.8 93.3 79.0 80.6
 CT 19.5 13.6 19.2 6.7 19.8 19.4
 TT 0.6 0 0 0 1.2 0
 T allele 10.3 6.8 9.6 3.3 11.1 9.7
COL11A2 rs1799907
 TT 44.9 36.9 42.9 37.9 46.8 36.1
 TA 40.1 43.1 38.6 37.9 41.6 47.2
 AA 15.0 20.0 18.6 24.1 11.7 16.7
 A allele 35.0 41.5 37.9 43.1 32.5 40.3
IL1A rs1800587
 CC 46.7 34.9 44.4 48.1 48.8 25.0
 CT 42.1 52.4 40.3 37.0 43.8 63.9
 TT 11.2 12.7 15.3 14.8 7.5 11.1a
 T allele 32.2 38.9 35.4 33.3 29.4 43.1
IL1B rs1143634
 CC 52.9 47.0 56.9 50.0 49.4 44.4
 CT 34.6 43.9 27.8 46.7 40.7 41.7
 TT 12.4 9.1 15.3 3.3 9.9 13.9
 T allele 29.7 31.1 29.2 26.7 30.2 34.7
IL6 rs1800797
 AA 24.8 23.1 23.3 13.8 30.0 16.7
 GA 51.0 50.8 57.5 55.2 45.0 47.2
 GG 24.2 26.1 19.2 31.0 25.0 36.1
 G allele 49.7 51.5 47.9 58.6 47.5 59.7
IL6 rs1800796
 GG 91.5 83.1 86.3 89.7 96.2 77.8
 GC 7.9 15.4 12.3 10.3 3.8 19.4
 CC 0.7 1.5 1.4 0 0 2.8b
 C allele 4.6 9.2 7.5 5.2 1.9 12.5
IL6 rs1800795
 CC 24.8 21.2 19.2 26.7 30.0 16.7
 GC 51.0 50.0 57.5 53.3 45.0 47.2
 GG 24.2 28.8 23.3 20.0 25.0 36.1
 G allele 49.7 53.8 52.1 46.7 47.5 59.7
IL6 rs13306435
 TT 97.4 98.5 98.6 100 96.3 97.2
 TA 2.6 1.5 1.4 0.0 3.7 2.8
 A allele 1.3 0.8 0.7 0 1.8 1.4
IL6 rs2069849
 CC 92.8 95.5 94.4 96.7 91.4 94.4
 CT 7.2 4.5 5.6 3.3 8.6 5.6
 T allele 3.6 2.3 2.8 1.7 4.3 2.8
VDR rs2228570
 CC 29.1 44.6 25.4 41.4 32.4 47.2
 CT 58.9 40.0 58.2 48.3 59.5 33.3
 TT 12.1 15.4 16.4 10.3 8.1 19.4
 T allele 41.5 35.4 45.5 34.5 37.8 36.1
VDR rs731236
 TT 37.0 43.8 39.7 37.9 34.6 48.6
 TC 48.0 42.2 49.3 48.3 46.9 37.1
 CC 14.9 14.91 11.0 13.8 18.5 14.3
 C allele 39.0 35.2 35.6 37.9 42.0 32.9
a

dominant model CT/TT vs CC: OR = 2.85 [1.19 - 6.83], pcorr=0.028

b

log-additive model: OR = 6.71 [1.71 - 26.3], pcorr=0.0105