Table 4.
Gene | SNP | Genomic position | Minor allele | Beta† | SE | P | Padj | |
---|---|---|---|---|---|---|---|---|
ATM | rs1800056 | Chr11: 107643213 | Ex17-67 (F858L) | C | 0.478 | 0.164 | 0.0041 | 0.122 |
BLM | rs7183841 | Chr15: 89095901 | IVS3-120 | C | 0.106 | 0.050 | 0.0351 | 1.000 |
BLM | rs4932363 | Chr15: 89124105 | IVS12-2951 | A | 0.177 | 0.086 | 0.0416 | 1.000 |
MEN1 | rs670358 | Chr11: 64348255 | downstream | A | 0.140 | 0.052 | 0.0083 | 0.066 |
MYC | rs4645946 | Chr8: 128817567 | Ex1+70 | A | 0.432 | 0.168 | 0.0110 | 0.274 |
NOLA1 | rs10516559 | Chr4: 110966179 | downstream | C | 0.138 | 0.066 | 0.0394 | 0.433 |
NOLA2 | rs6601217 | Chr5: 177501445 | upstream (in RMND5B) | G | -0.114 | 0.043 | 0.0094 | 0.057 |
NOLA2 | rs6873523 | Chr5: 177505533 | upstream (in RMND5B) | C | -0.108 | 0.042 | 0.0118 | 0.071 |
NOLA2 | rs13189047 | Chr5: 177511481 | IVS2-881 | A | -0.089 | 0.044 | 0.0422 | 0.253 |
NOLA3 | rs2169480 | Chr15: 32422661 | downstream | G | -0.093 | 0.043 | 0.0304 | 0.455 |
POT1 | rs4360236 | Chr7: 124313975 | IVS2+5581 | T | 0.124 | 0.054 | 0.0244 | 0.170 |
POT1 | rs727505 | Chr7: 124249317 | upstream | A | -0.091 | 0.043 | 0.0373 | 0.261 |
RAD50 | rs6884762 | Chr5: 131966629 | IVS13-262 | T | 0.286 | 0.115 | 0.0140 | 0.238 |
RAD51L3 | rs9915078 | Chr17: 30467328 | IVS3+2305 | G | 0.173 | 0.065 | 0.0080 | 0.144 |
TEP1 | rs2678685 | Chr14: 19949151 | IVS1+2253 | G | 0.103 | 0.037 | 0.0061 | 0.250 |
TEP1 | rs4246977 | Chr14: 19952431 | downstream | C | -0.080 | 0.037 | 0.0316 | 1.000 |
TERC | rs9860874 | Chr3: 170968965 | downstream (in ARPM1) | A | -0.114 | 0.046 | 0.0145 | 0.087 |
TERC | rs12638862 | Chr3: 170960200 | upstream | G | -0.114 | 0.046 | 0.0152 | 0.091 |
TERC | rs12696304 | Chr3: 170963965 | upstream | G | -0.105 | 0.049 | 0.0343 | 0.206 |
WRN | rs11574212 | Chr8: 31046197 | IVS7+812 | T | 0.223 | 0.107 | 0.0385 | 1.000 |
Represents the effect of each minor allele on telomere length from a linear regression model adjusting for age and gender; SE = standard error; Padj = Bonferroni corrected P by gene.