Table 1. Summary of the 10 interactome components that display altered phenotypes in response to Xanthomonas oryzae pv. oryzae (Xoo) or submergence treatment.
| Name | Locus IDPutative Function* | Genotype | Phenotype | Regulatory class |
| RAR1 | LOC_Os02g33180CHORD family disease-resistance protein | 5 segregating F3 families of Dongjin-RAR1 knockout X IRBB21 (XA21) | Enhanced susceptibility to Xoo | (+) disease resistance, XA21-dependent |
| OsEREBP-1 | LOC_Os02g54160AP2 transcription factor | Overexpression of OsEREBP-1 in Kitakke | Enhanced resistance to Xoo | (+) disease resistance |
| WAK25 | LOC_Os03g12470Wall-associated receptor kinase | Overexpression and RNAi of WAK25 in Kit-XA21 | OX: Enhanced resistance to Xoo;RNAi: Enhanced susceptibility to Xoo | (+) disease resistance, XA21-dependent |
| SCB3 | LOC_Os03g14120Dihydrodipicolinate reductase | Overexpression of SCB3 in LiaoGeng | Enhanced resistance to Xoo | (+) disease resistance |
| SnRK1A | LOC_Os05g45420Sucrose non-fermenting-1-related protein kinase-1 | RNAi of SnRK1A in Kit-XA21 | Enhanced susceptibility to Xoo | (+) disease resistance, XA21 dependent |
| OsMPK12 | LOC_Os06g49430Mitogen-activated protein kinase | Knockout of OsMPK12 in Dongjin | Enhanced susceptibility to Xoo | (+) disease resistance |
| OsMPK5 | LOC_Os03g17700Mitogen-activated protein kinase | RNAi of OsMPK5 in Nipponbare | Enhanced resistance to Xoo | (−) disease resistance |
| OsWRKY76 | LOC_Os09g25060WRKY transcription factor | Overexpression of OsWRKY76 in Kit-XA21 | Enhanced susceptibility to Xoo | (−) disease resistance, XA21-dependent |
| SAB23 | LOC_Os12g32980PHD domain protein | 3 segregating F3 families of Dongjin-SAB23 Activation X IRBB21 (XA21) | Enhanced susceptibility to Xoo | (−) disease resistance, XA21-dependent |
| SAB18 | LOC_Os11g06410SANT domain transcription factor | Knockout of SAB18 in Dongjin | Enhanced tolerance to submergence | (−) submergence tolerance |
*Putative function determined by BLASTP search.