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. 2011 Mar 4;286(16):14178–14189. doi: 10.1074/jbc.M110.199646

TABLE 1.

Virtual hits selected for experimental validation

NCIa no. IDb VS scorec SIEd Rank
614641 −35.1 −9.6 12
45210 C11 −34.7 −8.7 18
344553 −34.6 −8.7 20
162535 C35 −33.9 −8.3 38
79710 C10 −33.9 −8.8 41
641601 −33.4 −10.1 58
89166 C66 −33.0 −7.7 79
641753 −32.8 −8.2 92
7809 −32.8 −8.1 96
37204 C04 −32.7 −8.0 102
674000 −31.0 −8.8 257
623766 −29.4 −8.1 562

a National Cancer Institute.

b Short identification label.

c Values are in arbitrary units. These are the empirical scores from the docking step of the high throughput virtual screening (VS). More negative numbers suggest better affinity.

d Values are in kcal/mol. The final step in the virtual screening involves rescoring of the docked poses using a higher quality binding free energy calculation, in this case with the SIE function (34, 35). The predicted binding affinities are generally in the micromolar range.