Table 2.
Sample preparation | Mean (SD) Tt value (min) |
|
---|---|---|
HP-del | HP-5′ | |
Detection limit of purified DNA | ||
100 ng | 24.9 (4.0) | 23.7 (2.4) |
10 ng | 26.8 (4.2) | 26.3 (2.8) |
1 ng | 30.9 (5.5) | 30.0 (4.0) |
0.1 ng | 39.5 (5.3) | 33.0 (5.4) |
0.01 ng | — | 32.7 (5.4) |
0.001 ng | — | — |
Serial dilution by NaOH | ||
1:10 | * | * |
1:30 | 28.6 (1.5) | 29.9 (2.4) |
1:100 | 34.0 (3.7) | 32.6 (3.9) |
1:300 | 41.5 (10.1) | 37.4 (2.5) |
1:1000 | 45.8 (9.2) | 37.9 (7.9) |
1:3000 | * | * |
Water- or NaOH-diluted with/without heat | ||
×2 with water and heat | 31.8 (3.3) | 33.3 (4.5) |
×10 with water and heat | — | * |
×100 with NaOH and heat | 35.7 (4.0) | 36.7 (5.4) |
×100 with NaOH | 31.4 (2.9) | 32.2 (5.1) |
Serial proportion of NaOH | ||
1 | 33.5 (1.0) | 35.4 (6.4) |
2 | 35.4 (2.3) | 36.0 (3.9) |
4 | 42.4 (2.8) | 42.8 (8.4) |
8 | — | — |
Note: — represents the group in which turbidity was not observed, and asterisks represent the group in which turbidity was not consistently observed.
Tt, threshold time.