Table 2.
Prediction results
| Drug | linear max most | splines max most | fmm max most | periodic max most | natural max most |
|---|---|---|---|---|---|
| APV | 0.934 ± 0.001 | 0.929 ± 0.002 | 0.928 ± 0.001 | 0.927 ± 0.001 | 0.928 ± 0.001 |
| 0.932 ± 0.001 | 0.934 ± 0.001 | 0.932 ± 0.002 | 0.933 ± 0.001 | 0.933 ± 0.001 | |
| ATV | 0.936 ± 0.002 | 0.917 ± 0.003 | 0.920 ± 0.002 | 0.919 ± 0.002 | 0.920 ± 0.002 |
| 0.928 ± 0.002 | 0.915 ± 0.003 | 0.919 ± 0.003 | 0.918 ± 0.003 | 0.920 ± 0.003 | |
| IDV | 0.972 ± 0.001 | 0.968 ± 0.001 | 0.968 ± 0.001 | 0.968 ± 0.001 | 0.968 ± 0.001 |
| 0.970 ± 0.001 | 0.970 ± 0.001 | 0.971 ± 0.001 | 0.971 ± 0.001 | 0.972 ± 0.001 | |
| LPV | 0.964 ± 0.001 | 0.963 ± 0.001 | 0.963 ± 0.001 | 0.962 ± 0.001 | 0.963 ± 0.001 |
| 0.963 ± 0.001 | 0.964 ± 0.001 | 0.963 ± 0.001 | 0.963 ± 0.001 | 0.964 ± 0.001 | |
| NFV | 0.941 ± 0.001 | 0.938 ± 0.001 | 0.940 ± 0.001 | 0.940 ± 0.001 | 0.940 ± 0.001 |
| 0.939 ± 0.001 | 0.943 ± 0.001 | 0.947 ± 0.001 | 0.946 ± 0.001 | 0.945 ± 0.001 | |
| RTV | 0.984 ± 0.001 | 0.980 ± 0.001 | 0.981 ± 0.001 | 0.981 ± 0.001 | 0.981 ± 0.001 |
| 0.983 ± 0.001 | 0.986 ± 0.001 | 0.986 ± 0.001 | 0.986 ± 0.001 | 0.986 ± 0.001 | |
| SQV | 0.955 ± 0.001 | 0.950 ± 0.001 | 0.951 ± 0.001 | 0.951 ± 0.001 | 0.951 ± 0.001 |
| 0.952 ± 0.001 | 0.953 ± 0.001 | 0.957 ± 0.001 | 0.955 ± 0.001 | 0.956 ± 0.001 | |
| 3TC | 0.933 ± 0.002 | 0.936 ± 0.002 | 0.939 ± 0.002 | 0.938 ± 0.002 | 0.939 ± 0.002 |
| 0.927 ± 0.003 | 0.934 ± 0.002 | 0.937 ± 0.002 | 0.937 ± 0.002 | 0.937 ± 0.003 | |
| ABC | 0.916 ± 0.002 | 0.906 ± 0.002 | 0.909 ± 0.003 | 0.909 ± 0.002 | 0.909 ± 0.002 |
| 0.914 ± 0.003 | 0.910 ± 0.003 | 0.918 ± 0.003 | 0.919 ± 0.002 | 0.918 ± 0.003 | |
| AZT | 0.908 ± 0.002 | 0.890 ± 0.002 | 0.894 ± 0.002 | 0.893 ± 0.002 | 0.894 ± 0.002 |
| 0.908 ± 0.002 | 0.898 ± 0.002 | 0.905 ± 0.002 | 0.903 ± 0.002 | 0.904 ± 0.002 | |
| d4T | 0.903 ± 0.002 | 0.886 ± 0.002 | 0.889 ± 0.002 | 0.889 ± 0.002 | 0.889 ± 0.002 |
| 0.900 ± 0.002 | 0.892 ± 0.002 | 0.901 ± 0.002 | 0.899 ± 0.002 | 0.901 ± 0.002 | |
| ddI | 0.853 ± 0.003 | 0.829 ± 0.003 | 0.837 ± 0.003 | 0.836 ± 0.003 | 0.836 ± 0.002 |
| 0.852 ± 0.003 | 0.841 ± 0.003 | 0.846 ± 0.003 | 0.839 ± 0.003 | 0.844 ± 0.003 | |
| TDF | 0.832 ± 0.004 | 0.808 ± 0.005 | 0.817 ± 0.004 | 0.818 ± 0.005 | 0.816 ± 0.005 |
| 0.825 ± 0.005 | 0.812 ± 0.005 | 0.813 ± 0.005 | 0.814 ± 0.005 | 0.813 ± 0.005 | |
| DLV | 0.901 ± 0.002 | 0.888 ± 0.002 | 0.891 ± 0.002 | 0.891 ± 0.002 | 0.891 ± 0.002 |
| 0.898 ± 0.002 | 0.881 ± 0.002 | 0.882 ± 0.002 | 0.883 ± 0.002 | 0.883 ± 0.002 | |
| EFV | 0.932 ± 0.002 | 0.921 ± 0.002 | 0.928 ± 0.002 | 0.929 ± 0.002 | 0.928 ± 0.002 |
| 0.925 ± 0.002 | 0.911 ± 0.002 | 0.915 ± 0.002 | 0.919 ± 0.002 | 0.915 ± 0.002 | |
| NVP | 0.917 ± 0.002 | 0.910 ± 0.002 | 0.916 ± 0.002 | 0.917 ± 0.002 | 0.916 ± 0.002 |
| 0.908 ± 0.003 | 0.902 ± 0.003 | 0.906 ± 0.003 | 0.909 ± 0.003 | 0.906 ± 0.003 | |
| BVM | 0.918 ± 0.002 | 0.932 ± 0.002 | 0.932 ± 0.002 | 0.923 ± 0.003 | 0.933 ± 0.002 |
| GTP | 0.981 ± 0.001 | 0.979 ± 0.001 | 0.978 ± 0.001 | 0.977 ± 0.001 | 0.979 ± 0.001 |
| 0.980 ± 0.001 | 0.979 ± 0.001 | 0.979 ± 0.001 | 0.976 ± 0.001 | 0.979 ± 0.001 | |
| MIP | 0.815 ± 0.010 | 0.789 ± 0.013 | 0.789 ± 0.011 | 0.787 ± 0.016 | 0.788 ± 0.017 |
| 0.827 ± 0.012 | 0.815 ± 0.014 | 0.813 ± 0.014 | 0.816 ± 0.013 | 0.812 ± 0.013 | |
AUC ± standard deviations with max representing the maximal occuring sequence length within a dataset, most the most frequent sequence length in a dataset. For BVM most and max are the same.