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. 2011 Apr 19;6(4):e18457. doi: 10.1371/journal.pone.0018457

Table 1. Functional analysis of 64 Gap1 mutants.

Mutated Gap1 region gap1 allele Mutated sequence Mutant class Amino acid utilization Intoxication by D-His Localization
gap1-105 2-SNT-4 F + + pm
gap1-101 5-SSY-7 F + + pm
gap1-106 8-EKNN-11 F + + pm
gap1-107 12-PDNL-15 F + + pm
gap1-108 16-KHNG-19 F + + pm
gap1-109 20-ITID-23 F + + pm
gap1-110 24-SEFL-27 F + + pm
gap1-111 28-TQEP-31 F + + pm
gap1-112 32-ITIP-35 F + + pm
gap1-113 36-SNGS-39 F + + pm
N-terminal gap1-114 40-AVSI-43 F + + pm
tail gap1-115 44-DETG-47 F + + pm
gap1-116 48-SGSK-51 F + + pm
gap1-117 52-WQDF55 F + + pm
gap1-118 56-KDSF59 F + + pm
gap1-119 60-KRVK-63 F + + pm
gap1-120 64-PIEV-67 F + + pm
gap1-121 68-DPNL-71 F + + pm
gap1-122 72-SEAE-75 F + + pm
gap1-123 76-KVAI-79 F + + pm
gap1-124 80-ITAQ-83 F + + pm+v
gap1-125 84-TPLK-87 NF pm
gap1-126 88-HHLK-91 NF pm
gap1-127 92-NRH-94 NF pm
gap1-140 143-GELA-146 NF ER
gap1-141 147-VIFP-150 PF + ER+pm
gap1-142 151-ISGG-154 NF pm
Loop 2 gap1-143 155-FTTY-158 NF ER
gap1-144 159-ATRF-162 NF ER
gap1-145 163-IDE-165 NF ER
gap1-166 166-SFG-168 PF + ER+pm
gap1-167 219-NMF-221 F + + pm+v
Loop 4 gap1-168 222-GVK-224 PF + pm
gap1-146 225-GYGE-228 NF pm
gap1-151 307-SESV-310 NF pm
Loop 6 gap1-152 311-EPRK-314 PF + pm+v
gap1-153 315-SVPK-318 PF + pm
gap1-157 405-AEQR-408 F + + pm
gap1-158 409-FLPE-412 NF ER
Loop 8 gap1-159 413-IFSY-416 PF + ER + pm
gap1-160 417-VDRK-420 NF ER
gap1-169 421-GRP-423 NF ER
gap1-170 424-LVG-426 F + + pm
gap1-161 473-RFRK-476 NF ER
gap1-162 475-ALAA-480 F + + pm
Loop 10 gap1-163 481-QGRG-484 NF ER
gap1-164 485-LDEL-488 F + + pm
gap1-165 489-SFK-491 F + + pm
gap1-171 492-SPTG-495 PF + ER+pm
gap1-139 548-KIYK-551 NF ER
gap1-138 552-RNWK-555 NF ER
gap1-137 556-LFIP-559 NF ER
gap1-136 560-AEKM-563 F + + pm
gap1-104 564-DID-566 NF ER
gap1-103 T-567 F + + pm
C-terminal gap1-135 568-GRRE-571 F + + pm
tail gap1-134 572-VDLD-575 F + + pm
gap1-133 576-LLKQ-579 F + + pm
gap1-132 580-EIAE-583 F + + pm
gap1-131 584-EKAI-587 F + + pm
gap1-130 588-MATK-591 F + + pm
gap1-129 592-PRWY-595 F + + pm
gap1-128 596-RIWN-599 F + + pm
gap1-102 600-FWC-602 F + + pm

Strains gap1Δ ura3 and gap1Δ ssy1Δ ura3 transformed with the centromere-based plasmids carrying the indicated gap1 allele were tested for growth on solid media containing citrulline or phenylalanine, respectively, as sole nitrogen source. The gap1Δ ura3 cells were also tested for growth on a proline medium containing D-histidine. The + and − signs mean that transformed cells are able to utilize citrulline and phenylalanine (column “Amino acid utilization”) or to be intoxified by D-histidine (column “Intoxication by D-His)”). Transformed cells of the gap1Δ ura3 strain were also grown on proline as sole nitrogen source and examined under the fluorescence microscope. The Gap1-GFP proteins were localized at the cell surface (pm, plasma membrane), vacuolar lumen (v), or endoplasmic reticulum (ER), or in several of these cell membranes. Mutant classes: F: functional, NF: non functional; PF: partially functional.