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. 2011 Apr 19;6(4):e18814. doi: 10.1371/journal.pone.0018814

Table 3. Known endo- and exo-hemicellulases predicted from the Fibrobacter succinogenes S85 genome.

CAZy Family Fisuc Locus FSU Locusa CBM Family Basic Terminal domainb Signal Peptide In Silico Prediction Characterized Activity Reference
GH2 Fisuc_1788 FSU_2288 BTD Yes β-galactosidase
GH2 Fisuc_3049 FSU_0315 No β-galactosidase β-galactosidase This work
GH3 Fisuc_1751 FSU_2249 Yes β-xylosidase
GH3 Fisuc_1985 FSU_2508 Yes β-xylosidase
GH3 Fisuc_2065 FSU_2592 Yes β-xylosidase cellobiosidase This work
GH10 Fisuc_0754 FSU_1192 Yes xylanase
GH10 Fisuc_0757 FSU_1195 Yes xylanase
GH10 Fisuc_1791 FSU_2292 CBM6 BTD Yes xylanase [32]
GH10 Fisuc_1793 FSU_2293 CBM6 BTD yes xylanase xylanase [32]
GH10 Fisuc_1794 FSU_2294 CBM6 BTD Yes xylanase xylanase [32]
GH10 Fisuc_2303 FSU_2851 BTD Yes endoglucanase
GH10 Fisuc_2992 FSU_0257 Yes cellulase [33]
GH11 Fisuc_0362 FSU_0777 BTD Yes xylanase xylanase [34]
GH11 Fisuc_2201 FSU_2741 BTD Yes xylanase xylanase [22]
GH11 Fisuc_2442 FSU_3006 Yes xylanase xylanase [22]
GH18 Fisuc_1530 FSU_2012 Yes chitinase cellulose binding [35]
GH18 Fisuc_2465 FSU_3030 Yes chitinase
GH26 Fisuc_0727 FSU_1165 CBM35 Yes mannanase β-mannanase This work
GH26 Fisuc_0729 FSU_1167 CBM35 Yes mannanase β-mannanase This work
GH26 Fisuc_0730 FSU_1168 Yes mannanase β-mannanase [22]
GH26 Fisuc_1266 FSU_1729 Yes mannanase
GH26 Fisuc_1688 FSU_2181 CBM35 Yes mannanase
GH43 Fisuc_1762 FSU_2262 CBM6 BTD No β-xylosidase
GH43 Fisuc_1763 FSU_2263 CBM6 BTD Yes β-xylosidase
GH43 Fisuc_1764 FSU_2264 CBM6 BTD Yes β-xylosidase [22]
GH43 Fisuc_1769 FSU_2269 CBM6 BTD No β-xylosidase arabinoxylanase This work
GH43 Fisuc_1775 FSU_2274 CBM6 BTD Yes β-xylosidase
GH43 Fisuc_1994 FSU_2517 CBM35, CBM61 Yes β-xylosidase arabinase This work
GH43 Fisuc_1997 FSU_2520 No xylanase
GH43 Fisuc_1998 FSU_2521 Yes β-xylosidase
GH43 Fisuc_1999 FSU_2522 CBM35 No β-xylosidase
GH43 Fisuc_2621 FSU_3190 Yes β-xylosidase
GH43 Fisuc_2622 FSU_3191 CBM35 Yes β-xylosidase
GH43 Fisuc_2623 FSU_3192 CBM35 Yes β-xylosidase
GH43 Fisuc_2886 FSU_0145 Yes β-xylosidase
GH43 Fisuc_2929 FSU_0192 CBM6 BTD No xylanase
a

FSU locus tags refer to the equivalent ORF call in the F. succinogenes genome sequence project described by GenBank accession: CP002158.

b

Basic Terminal Domain (BTD) is also known as F. succinogenes-specific paralogous module 1 (FPm-1) [46].