Table 2.
Twenty Lowest P Values for Survival Analysis to AIDS-1987, Co-dominant Model
| Rank | rs number | chr | Position | Gene | MAF | P | HRb |
| 1 | rs11884476 | 2 | 206,026,838 | PARD3B | .0631 | 3.370E-09 | 0.301 |
| 2 | rs11896375 | 2 | 206,015,793 | PARD3B | .0642 | 4.174E-08 | 0.347 |
| 3 | rs10185378 | 2 | 206,013,401 | PARD3B | .0609 | 9.234E-08 | 0.349 |
| 4 | rs10210768 | 2 | 205,998,621 | PARD3B | .0689 | 1.585E-07 | 0.387 |
| 5 | rs11886997 | 2 | 206,039,636 | PARD3B | .0663 | 4.496E-07 | 0.388 |
| 6 | rs13410658 | 2 | 206,050,327 | PARD3B | .0589 | 5.143E-07 | 0.362 |
| 7 | rs6467710 | 7 | 136,854,359 | DGKI | .0159 | 5.596E-07 | 4.302 |
| 8 | rs880343 | 2 | 206,023,936 | PARD3B | .0675 | 1.134E-06 | 0.416 |
| 9 | rs11239930 | 1 | 145,027,188 | NBPF14 | .4184 | 1.556E-06 | 0.681 |
| 10 | rs7565154 | 2 | 206,034,837 | PARD3B | .0742 | 1.923E-06 | 0.443 |
| 11 | rs7217319 | 17 | 38,924 | RPH3AL | .3714 | 4.482E-06 | 0.677 |
| 12 | rs6441975 | 3 | 46,403,194 | CCRL2 | .3138 | 4.643E-06 | 1.483 |
| 13 | rs477687 | 5 | 134,495,599 | H2AFY | .1807 | 5.744E-06 | 1.548 |
| 14 | rs1015164 | 3 | 46,426,684 | LTF | .3088 | 8.636E-06 | 1.463 |
| 15 | rs10932110 | 2 | 206,050,138 | PARD3B | .0622 | 8.868E-06 | 0.429 |
| 16 | rs1553477 | 5 | 53,152,723 | ARL15 | .4651 | 1.335E-05 | 0.699 |
| 17 | rs17112431 | 14 | 20,027,330 | RNASE10 | .2078 | 1.456E-05 | 0.644 |
| 18 | rs17225585 | 17 | 66,882,025 | SOX9 | .1245 | 1.750E-05 | 0.568 |
| 19 | rs7275915 | 21 | 34,753,498 | KCNE1 | .1851 | 1.979E-05 | 0.627 |
| 20 | rs4397202 | 6 | 168,718,725 | SMOC2 | .0471 | 2.024E-05 | 2.092 |
NOTE. Rank of P values for 700,022 SNPs tested. chr, chromosome; MAF, minor allele frequency; HR, hazard ratio; Chromosome assignment, base-pair positions, and gene associations of single-nucleotide polymorphisms (SNPs) presented here are from Affymetrix SNP Annotation, version 13.1, which is based on National Center for Biotechnology Information human genome build 36.1.