Table 2.
Nucleotide and amino acid sequence divergence among the JEV strains
| Genotype | Divergence (%) from:* | ||||||
|---|---|---|---|---|---|---|---|
| GI (nine strains) | GII (Bennett) | GII (WTP-70-22) | GII (JKT654) | GII (FU) | GIII (nine strains) | GIV (JKT6468) | |
| GI (nine strains) | 1.5–2.9 | 1.7–3.0 | 1.7–3.1 | 1.9–3.3 | 1.6–3.8 | 5.0–6.2 | |
| GII (Bennett) | 9.1–9.7 | 0.5 | 0.5 | 0.8 | 1.7–2.6 | 5.1 | |
| GII (WTP-70-22) | 9.5–10.1 | 2.5 | 0.5 | 0.8 | 1.9–2.8 | 5.0 | |
| GII (JKT654) | 9.8–10.4 | 3.1 | 2.8 | 0.9 | 1.9–2.8 | 5.1 | |
| GII (FU) | 10.1–10.7 | 4.0 | 3.3 | 4.3 | 2.0–3.0 | 5.4 | |
| GIII (18 strains) | 10.8–11.9 | 10.2–10.9 | 10.5–11.3 | 10.7–11.5 | 10.9–11.7 | 4.6–5.5 | |
| GIV (JKT6468) | 16.6–17.2 | 16.2 | 16.4 | 16.6 | 16.6 | 15.4–16.1 | |
*Nucleotide divergence is in normal type and amino acid divergence is in bold type.