Table 5.
Gene | All | GI | GII | GIII | GIV | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GC12 | GC3 | NC | GC12 | GC3 | NC | GC12 | GC3 | NC | GC12 | GC3 | NC | GC12 | GC3 | NC | |
ORF | 0.51 | 0.53 | 55.55 | 0.51 | 0.54 | 55.13 | 0.51 | 0.52 | 55.85 | 0.51 | 0.53 | 55.68 | 0.51 | 0.51 | 55.73 |
C | 0.51 | 0.49 | 55.52 | 0.51 | 0.51 | 47.23 | 0.52 | 0.51 | 60.06 | 0.51 | 0.48 | 58.79 | 0.50 | 0.50 | 53.19 |
prM | 0.47 | 0.57 | 59.45 | 0.48 | 0.58 | 57.98 | 0.47 | 0.52 | 59.73 | 0.47 | 0.58 | 60.03 | 0.47 | 0.52 | 61.00 |
E | 0.51 | 0.51 | 56.56 | 0.51 | 0.48 | 57.26 | 0.51 | 0.48 | 55.82 | 0.51 | 0.53 | 56.40 | 0.50 | 0.49 | 56.11 |
NS1 | 0.50 | 0.52 | 56.08 | 0.50 | 0.53 | 56.44 | 0.50 | 0.51 | 56.71 | 0.50 | 0.52 | 55.82 | 0.50 | 0.49 | 55.30 |
NS2A | 0.50 | 0.57 | 54.18 | 0.50 | 0.58 | 53.47 | 0.49 | 0.59 | 52.44 | 0.50 | 0.56 | 54.81 | 0.49 | 0.59 | 55.43 |
NS2B | 0.53 | 0.48 | 60.54 | 0.54 | 0.52 | 61.00 | 0.53 | 0.46 | 58.16 | 0.53 | 0.47 | 60.98 | 0.54 | 0.50 | 58.11 |
NS3 | 0.51 | 0.51 | 55.04 | 0.51 | 0.53 | 53.44 | 0.51 | 0.51 | 54.86 | 0.51 | 0.51 | 55.84 | 0.52 | 0.49 | 55.75 |
NS4A | 0.52 | 0.53 | 53.80 | 0.52 | 0.57 | 50.58 | 0.51 | 0.53 | 45.07 | 0.52 | 0.51 | 56.78 | 0.52 | 0.52 | 61.00 |
NS4B | 0.54 | 0.55 | 56.20 | 0.53 | 0.58 | 54.89 | 0.53 | 0.51 | 55.85 | 0.54 | 0.56 | 57.13 | 0.53 | 0.50 | 51.22 |
NS5 | 0.51 | 0.55 | 54.17 | 0.51 | 0.56 | 54.31 | 0.51 | 0.55 | 53.86 | 0.51 | 0.54 | 54.09 | 0.50 | 0.53 | 55.50 |