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. 2011 Apr 22;6(4):e19091. doi: 10.1371/journal.pone.0019091

Table 1. Summary of common CNVRs (Freq.>5%).

CNV region Length (kb) No. of CNVs CNV Frequency* No. of genes Gene Overlapping with DGV**
chr18:64835114–64906488 71.4 169 0.219 1 CCDC102B YES
chr19:20368239–20528316 160.1 145 0.188 2 ZNF737,ZNF826 YES
chr4:162050188–162154792 104.6 137 0.178 0 YES
chr14:43524894–43690442 165.5 99 0.128 0 YES
chr18:3559620–3561217 1.6 88 0.114 1 DLGAP1 YES
chr8:4905758–5947152 1041.4 84 0.109 0 YES
chr15:45994758–45999227 4.5 79 0.102 0 YES
chr11:5828407–5911385 83.0 66 0.086 2 OR52E4,OR52E8 YES
chr21:16693940–16716168 22.2 57 0.074 1 C21orf34 YES
chr8:15447669–15471819 24.2 54 0.070 1 TUSC3 YES
chr22:20352005–21702142 1350.1 52 0.067 13 GGTLC2,LOC648691,LOC96610,MAPK1,POM121L1P,PPIL2,PPM1F,PRAME,TOP3B,VPREB1,YPEL1,ZNF280A,ZNF280B YES
chr4:153203765–153212191 8.4 50 0.065 0 YES
chr3:65166887–65187636 20.7 48 0.062 0 YES
chr6:31463297–31572718 109.4 48 0.062 3 HCG26,HCP5,MICA YES
chr12:130289496–130380887 91.4 47 0.061 0 YES
chr9:11743695–12194748 451.1 46 0.060 0 YES
chr10:90934639–90935788 1.1 44 0.057 0 YES
chr12:7861988–8017012 155.0 44 0.057 2 SLC2A14,SLC2A3 YES
chr8:145028388–145358471 330.1 42 0.054 13 C8orf30A,CYC1,EXOSC4,GPAA1,GRINA,HEATR7A,KIAA1875,MAF1,OPLAH,PARP10,PLEC1,SHARPIN,SPATC1 YES
chr5:32137157–32205304 68.1 40 0.052 2 GOLPH3,PDZD2 YES
chr5:41251228–41270765 19.5 40 0.052 1 C6 YES

*The CNV frequencies were obtained by number of total identified CNVs/number of total subjects.

**Database of genomic variants (http://projects.tcag.ca/variation).