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. 2011 Feb 12;156(5):855–868. doi: 10.1007/s00705-011-0926-y

Table 4.

Genotype and subgenotypes distribution of 440 HBV isolates from various geographical regions in Indonesia

Genotype Accession number Geographic origin/reported from
B2 GU071382, GU071383, GU071384, GU071387, GU071365, GU071367, GU071368, GU071369, GU071370, GU071372, GU071374, GU071376, GU071377, GU071380, GU071614, GU071309, GU071439, GU071573 Java, Lombok, North and West Sumatra
B3 GU071379, GU071378, GU071375, GU071371, GU071373, GU071389, GU071389, GU071390, GU071391, GU071388, GU071283, GU071287, GU071285, GU071313, GU071347, GU071626, GU071627, GU071628, GU071623, GU071612, GU071615, GU071616, GU071617, GU071618, GU071613, GU071516, GU071517, GU071520, GU071522, GU071515, GU071433, GU071459, GU071529, GU071460, GU071462, GU071463, GU071464, GU071465, GU071466, GU071467, GU071468, GU071469, GU071471, GU071472, GU071473, GU071474, GU071476, GU071477, GU071478, GU071479, GU071480, GU071481, GU071482, GU071483, GU071484, GU071485, GU071486, GU071487, GU071488, GU071489, GU071490, GU071491, GU071492, GU071493, GU071494, GU071495, GU071496, GU071497, GU071498, GU071499, GU071502, GU071504, GU071505, GU071507, GU071508, GU071509, GU071510, GU071512, GU071513, GU071440, GU071441, GU071442, GU071443, GU071444, GU071447, GU071448, GU071451, GU071571, GU071575, GU071577, GU071546, GU071555, GU071563, GU071405, GU071406, GU071407, GU071408, GU071409, GU071410, GU071411, GU071412, GU071413, GU071414, GU071415, GU071416, GU071417, GU071418, GU071420, GU071421, GU071422, GU071423, GU071424, GU071425, GU071426, GU071427, GU071428, GU071429, GU071430, GU071431, GU071398, GU071401, GU071399 Java, North and West Sumatra, Mentawai, South Sulawesi, Lombok, East Flores, Alor
B5 GU071402, GU071403, GU071404, GU071548, GU071308, GU071590, GU071592, GU071593, GU071531, GU071453, GU071455, GU071458, GU071454, GU071434, GU071436, GU071523, GU071521, GU071671, GU071677, GU071357, GU071349, GU071350, GU071352, GU071322 Java, West Sumatra, South Sulawesi, Nias, Mentawai, West and East Sumba, East Flores
B7 GU071400, GU071450, GU071310, GU071456, GU071437, GU071438, GU071514, GU071519, GU071526, GU071638, GU071636, GU071674, GU071711, GU071664, GU071670, GU071676, GU071720, GU071721, GU071662, GU071690, GU071696, GU071703, GU071704, GU071695, GU071695, GU071668, GU071718, GU071719, GU071356, GU071358, GU071363, GU071643, GU071644, GU071651, GU071336, GU071337, GU071338, GU071339, GU071340, GU071341, GU071342, GU071343, GU071344, GU071345, GU071346, GU071320, GU071321, GU071324, GU071326, GU071331, GU071334, GU071311, GU071348, GU071354, GU071355, GU071312, GU071314, GU071353, GU071316, GU071317, GU071318, GU071319, GU071284, GU071295, GU071294, GU071282, GU071298, GU071292, GU071631 Java, North Sumatra, South Sulawesi, West and East Sumba, West and East Flores, Alor, Ternate,
B8 GU071432, GU071561, GU071562, GU071567, GU071558, GU071552, GU071553, GU071445, GU071532, GU071619, GU071621, GU071622, GU071624, GU071625, GU071646, GU071648, GU071649, GU071650, GU071655, GU071656, GU071659, GU071661, GU071291 Java, West and North Sumatra, Mentawai, Lombok, West Flores, Alor
B9 GU071547, GU071574, GU071588, GU071591, GU071594, GU071589, GU071595, GU071527, GU071530, GU071528, GU071620, GU071672, GU071673, GU071675, GU071678, GU071679, GU071680, GU071681, GU071682, GU071683, GU071684, GU071685, GU071686, GU071687, GU071688, GU071689, GU071665, GU071667, GU071669, GU071708, GU071709, GU071710, GU071712, GU071713, GU071715, GU071716, GU071717, GU071691, GU071692, GU071693, GU071694, GU071697, GU071698, GU071699, GU071700, GU071701, GU071702, GU071705, GU071706, GU071707, GU071663, GU071364, GU071359, GU071642, GU071640, GU071645 West Sumatra, Nias, Mentawai, Lombok, West and East Sumba
C1 GU071419, GU071580, GU071581, GU071582, GU071583, GU071584, GU071538, GU071545, GU071551, GU071554, GU071556, GU071549, GU071557, GU071559, GU071564, GU071565, GU071568, GU071569, GU071570, GU071572, GU071576, GU071578, GU071578, GU071579, GU071541, GU071540, GU071542, GU071539, GU071537, GU071457, GU071435, GU071637, GU071361, GU071647, GU071652, GU071653, GU071654, GU071657, GU071658, GU071660, GU071315, GU071351, GU071329, GU071330, GU071333, GU071335, GU071289, GU071290, GU071297, GU071296, GU071629, GU071634, GU071299, GU071300, GU071301, GU071302, GU071303, GU071304, GU071306, GU071366, GU071397, GU071392, GU071393, GU071394, GU071395, GU071396, GU071385 Java, West Sumatra, South Sulawesi, East Sumba, West and East Flores, Alor, Ternate, Moluccas
C2 GU071550, GU071543, GU071544, GU071560, GU071566, GU071587, GU071585, GU071586, GU071446, GU071452, GU071449, GU071470, GU071475, GU071500, GU071501, GU071503, GU071506, GU071511, GU071461, GU071307, GU071525, GU071524, GU071639, GU071362, GU071360, GU071641, GU071323, GU071325, GU071327, GU071328, GU071332, GU071288, GU071293, GU071286, GU071608, GU071599, GU071611, GU071602, GU071597, GU071381, GU071386 Java, North and South Sumatra, South Sulawesi, East Sumba, West and East Flores, Alor, Papua
C5 GU071536, GU071534, GU071535, GU071533, GU071630, GU071632, GU071633, North Sulawesi, Ternate
C6 GU071596, GU071606, GU071601, GU071603, GU071605, GU071607, GU071604 Papua
D1 GU071518, GU071635, GU071609 South Sulawesi, Papua
D3 GU071305, GU071600, GU071610, GU071598 Moluccas, Papua

The genotypes and subgenotypes of the 440 HBV isolates collected in the present study (Table 1) were determined from the sequence of the preS2 region of the HBV genome, employing the genotype- and subgenotype-specific SNPs described in Table 2