Table 1.
Sequence statistics of the BES of common carp
| BAC end sequencing reads | 80,448 |
|---|---|
| BES a | 75,744 |
| BES after trimming b | 72,789(96.1%) |
| Redundant BES c | 7,069 |
| BES after filtering redudance | 65,720 |
| Average read length (bp) | 647 |
| BES mate-pairs d | 29,046(88.4%) |
| Total bases sequenced | 42,522,168 |
| Vertebrates Repeat masked bases | 7,356,797(17.3%) |
a Number of sequences with phred base calling (quality score ≥ 20) with edited read length ≥50 bp
b Number of sequences free of E. coli and vector DNA, with edited read length ≥50 bp
c Number of sequences with 95% identity and full-length covered by selfblasting
d Number of clones with both ends successfully sequenced