Table 3. Example table: description of genetic variants used in the analyses.
SNP | Locus | Chromosome | Locus relative to gene | Risk allele | Source |
---|---|---|---|---|---|
rs10923931 | NOTCH2 | 1 | Intron 5 | T | Zeggini et al |
rs10490072 | BCL11A | 2 | 3′ of gene | T | Zeggini et al |
rs7578597 | THADA | 2 | Missense, exon 24 | T | Zeggini et al |
rs1470579 | IGF2BP2 | 3 | Intron 2 | C | Saxena et al |
rs1801282 | PPARg | 3 | Intron 1 | C | Saxena et al |
rs4607103 | ADAMTS9 | 3 | Intron 2 | C | Zeggini et al |
rs7754840 | CDKAL1 | 6 | Intron 5 | C | Saxena et al |
rs9472138 | VEGFA | 6 | 3′ of gene | T | Zeggini et al |
rs864745 | JAZF1 | 7 | Intron 1 | T | Zeggini et al |
rs13266634 | SLC30A8 | 8 | Missense, exon 8 | C | Saxena et al |
rs10811661 | CDKNA/2B | 9 | 5′ of gene | T | Saxena et al |
rs1111875 | HHEX | 10 | 3′ of gene | C | Saxena et al |
rs12779790 | CDC123,CAMK1D | 10 | 3′ of gene | G | Zeggini et al |
rs7903146 | TCF7L2 | 10 | Intron 6 | T | Saxena et al |
rs5219 | KCNJ11 | 11 | Missense, exon 1 | T | Saxena et al |
rs689 | INS | 11 | Intron 1 | T | Meigs et al |
rs1153188 | DCD | 12 | 5′ of gene | A | Zeggini et al |
rs7961581 | TSPAN8, LGR5 | 12 | 5′ of gene | C | Zeggini et al |
Adapted from ref. 48.