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. 2011 Apr 29;6(4):e18887. doi: 10.1371/journal.pone.0018887

Figure 2. Force curve segmentation.

Figure 2

The approach and retraction curves correspond to the marked pixel in the E. coli cell image shown in Figure 4c. (a) Approach curve: experimental data. The curve is preprocessed by subtraction of an affine baseline. (b) Segmentation results with 6 discontinuity points. In the interval z āˆˆ [āˆ’2500, āˆ’2000] nm, only three discontinuity points are present. Both points represented with dashed arrows are the edges Inline graphic and Inline graphic of the electrostatic region. The next discontinuity point (Inline graphic nm) marked by a plain arrow is used as initial estimation of the transition between Hertz and Hooke regimes. (cā€“d) Retraction curve. The polynomial degree is set to Inline graphic leading to a piecewise affine approximation of the original signal. The threshold value Inline graphic for the mean squared error is set to the empirical noise variance, and 20 discontinuities at most are detected. For the displayed retraction curve, 20 iterations were performed leading to 20 discontinuities.