Table 3.
Dietary intake | Gene | Locus | Genotype | Cases/ controls | ORa | Pinteractionb | Correctedc Pinteraction |
---|---|---|---|---|---|---|---|
PhIP per 1,000 ng/day | CYP1B1 | rs10012 | CC | 344/375 | 0.81 (0.58–1.12) | 0.019 | 0.384 |
CG | 293/296 | 1.47 (0.93–2.30) | |||||
GG | 71/59 | 1.76 (0.60–5.21) | |||||
CG/GG | 364/355 | 1.53 (1.02–2.30) | |||||
CYP1B1 | rs1056836 | CC | 232/250 | 1.86 (1.07–3.22) | 0.019 | 0.384 | |
CG | 337/344 | 0.86 (0.64–1.15) | |||||
GG | 137/137 | 0.82 (0.33–2.08) | |||||
CG/GG | 474/481 | 0.85 (0.64–1.13) | |||||
NQO1 | rs1800566 | CC | 416/474 | 1.03 (0.76–1.40) | 0.007 | 0.340 | |
CT | 244/225 | 0.99 (0.60–1.61) | |||||
TT | 25/17 | – | |||||
CT/TT | 269/242 | 0.80 (0.52–1.24) | |||||
B[a]P per 100 ng/day | CYP1B1 | rs10012 | CC | 344/375 | 0.74 (0.55–1.00) | 0.005 | 0.340 |
CG | 293/296 | 1.25 (0.94–1.68) | |||||
GG | 71/59 | 1.66 (0.73–3.81) | |||||
CG/GG | 364/355 | 1.29 (0.99–1.68) | |||||
CYP3A4 | rs2242480 | GG | 558/579 | 1.02 (0.83–1.21) | 0.021 | 0.384 | |
GA | 126/131 | 1.13 (0.69–1.85) | |||||
AA | 12/14 | – | |||||
GA/AA | 138/145 | 0.89 (0.56–1.42) | |||||
Nitrate + Nitrite per 0.5 mg/day | CYP1A1 | rs1048943 | AA | 646/684 | 1.03 (0.92–1.15) | 0.022 | 0.384 |
AG | 44/38 | 1.11 (0.75–1.59) | |||||
GG | 2/3 | – | |||||
AG/GG | 46/41 | 1.14 (0.79–1.64) |
Data are limited to SNPs with statistically significant tests for interaction before correction.
Adjusted for age, gender and ethnicity.
Likelihood ratio test for model with cross-product terms of dietary variables (coded as continuous) with the genotype variables (coded as Dummy variables) compared to null model with only main effects for dietary variables and genotypes.
Based on false discovery rate.