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. 2011 May 3;6(5):e19035. doi: 10.1371/journal.pone.0019035

Table 1. SVM Parameters.

Parameter Min Max Optimal Value
C (cost) 0.1 10 1.67
Inline graphic (width) .001 1000 2.1
d (order of string kernel) 1 6 5
d' (order of spectrum kernel) 1 10 8
g (gaps allowed) 0 3 1

Tested range and optimal values for SVM kernel function parameters. Integer values were tested for the entire range. Non-integer parameters were set using values within their ranges in two successive grid search of decreasing step value.