Table 1.
List of differentially expressed genes between CLL cases with and without deletion 11q, ranked by significance levels at a FDR of <0.1.
| Probe ID | Symbol | Cytoband | Log2-fold change | FDR |
|---|---|---|---|---|
| 203647_s_at | FDX1 | 11q22 | −1.06 | 3E-05 |
| 219374_s_at | ALG9 | 11q23 | −0.96 | 8E-05 |
| 204977_at | DDX10 | 11q22 | −0.95 | 9E-05 |
| 229989_at | LOC91893 | 11q23 | −1.23 | 1E-04 |
| 237040_at | CWF19L2 | 11q22 | −0.91 | 1E-04 |
| 202170_s_at | AASDHPPT | 11q22 | −1.10 | 2E-04 |
| 203532_x_at | CUL5 | 11q22 | −1.27 | 5E-04 |
| 205412_at | ACAT1 | 11q22 | −0.92 | 1E-03 |
| 235045_at | RBM7 | 11q23 | −0.94 | 1E-03 |
| 211584_s_at | NPAT | 11q22 | −1.02 | 1E-03 |
| 202883_s_at | PPP2R1B | 11q23 | −0.72 | 2E-03 |
| 232449_at | BCDO2 | 11q22 | −0.95 | 2E-03 |
| 209798_at | NPAT | 11q22 | −0.67 | 2E-03 |
| 240621_at | ATM | 11q22 | −1.05 | 2E-03 |
| 218400_at | OAS3 | 12q24 | 2.04 | 2E-03 |
| 1566514_at | CWF19L2 | 11q22 | −0.94 | 3E-03 |
| 235610_at | ALKBH8 | 11q22 | −0.77 | 4E-03 |
| 209694_at | PTS | 11q22 | −1.03 | 4E-03 |
| 227432_s_at | INSR | 19p13 | 3.00 | 4E-03 |
| 1558589_at | C21orf15 | 21q11 | −3.31 | 4E-03 |
| 203533_s_at | CUL5 | 11q22 | −0.78 | 4E-03 |
| 226450_at | INSR | 19p13 | 2.52 | 4E-03 |
| 213792_s_at | INSR | 19p13 | 3.15 | 4E-03 |
| 223151_at | DCUN1D5 | 11q22 | −0.67 | 5E-03 |
| 1553750_a_at | FAM76B | 11q21 | −0.93 | 5E-03 |
| 228777_at | KBTBD3 | 11q22 | −0.69 | 8E-03 |
| 230393_at | CUL5 | 11q22 | −0.84 | 8E-03 |
| 212672_at | ATM | 11q22 | −0.63 | 8E-03 |
| 231472_at | FBXO15 | 18q22 | 1.05 | 10E-03 |
| 202884_s_at | PPP2R1B | 11q23 | −0.62 | 1E-02 |
| 1559028_at | LOC284233 | 18p11 | −2.64 | 1E-02 |
| 211150_s_at | DLAT | 11q23 | −0.81 | 2E-02 |
| 218314_s_at | C11orf57 | 11q23 | −0.55 | 2E-02 |
| 235713_at | ALKBH8 | 11q22 | −0.68 | 2E-02 |
| 214463_x_at | HIST1H4K | 6p22 | −0.71 | 2E-02 |
| 223430_at | SNF1LK2 | 11q23 | −0.72 | 2E-02 |
| 232048_at | FAM76B | 11q21 | −0.82 | 2E-02 |
| 218194_at | REXO2 | 11q23 | −0.68 | 2E-02 |
| 231837_at | USP28 | 11q23 | −0.75 | 2E-02 |
| 231538_at | C11orf1 | 11q23 | −1.00 | 3E-02 |
| 221438_s_at | TEX12 | 11q23 | −0.65 | 3E-02 |
| 1554947_at | ACAT1 | 11q22 | −0.62 | 3E-02 |
| 204969_s_at | RDX | 11q23 | −0.94 | 3E-02 |
| 218379_at | RBM7 | 11q23 | −0.90 | 3E-02 |
| 210858_x_at | ATM | 11q22 | −0.88 | 3E-02 |
| 230724_s_at | C11orf57 | 11q23 | −0.76 | 3E-02 |
| 202026_at | SDHD | 11q23 | −0.67 | 3E-02 |
| 209737_at | MAGI2 | 7q21 | 1.29 | 3E-02 |
| 208442_s_at | ATM | 11q22 | −0.97 | 3E-02 |
| 231530_s_at | C11orf1 | 11q23 | −0.95 | 3E-02 |
| 222785_x_at | C11orf1 | 11q23 | −0.95 | 4E-02 |
| 1559239_s_at | ACAT1 | 11q22 | −0.75 | 4E-02 |
| 202912_at | ADM | 11p15 | 2.23 | 4E-02 |
| 1552825_at | ZNF396 | 18q12 | 0.66 | 4E-02 |
| 203491_s_at | CEP57 | 11q21 | −0.84 | 4E-02 |
| 228817_at | ALG9 | 11q23 | −0.66 | 5E-02 |
| 203531_at | CUL5 | 11q22 | −0.54 | 5E-02 |
| 1552422_at | C10orf25 | 10q11 | 1.00 | 5E-02 |
| 208580_x_at | HIST1H4J | 6p22 | −0.68 | 5E-02 |
| 218412_s_at | GTF2IRD1 | 7q11 | 2.15 | 5E-02 |
| 205944_s_at | CLTCL1 | 22q11 | 1.60 | 7E-02 |
| 213149_at | DLAT | 11q23 | −0.76 | 7E-02 |
| 202351_at | ITGAV | 2q31 | 2.82 | 7E-02 |
| 1569431_at | PAFAH1B2 | 11q23 | −0.55 | 7E-02 |
| 209310_s_at | CASP4 | 11q22 | −0.66 | 7E-02 |
| 222588_s_at | C11orf57 | 11q23 | −0.69 | 7E-02 |
| 1563906_at | SOBP | 6q21 | 1.18 | 7E-02 |
| 205352_at | SERPINI1 | 3q26 | 0.84 | 7E-02 |
| 217388_s_at | KYNU | 2q22 | −0.62 | 7E-02 |
| 225270_at | NEO1 | 15q22 | 1.46 | 7E-02 |
| 233613_x_at | REXO2 | 11q23 | −0.71 | 7E-02 |
| 1555803_a_at | C11orf57 | 11q23 | −0.70 | 7E-02 |
| 1566515_at | CWF19L2 | 11q22 | −0.68 | 7E-02 |
| 1552988_at | C11orf65 | 11q22 | −0.82 | 7E-02 |
| 234698_at | N6AMT1 | 21q21 | 0.99 | 7E-02 |
| 229034_at | SOBP | 6q21 | 1.20 | 8E-02 |
| 234978_at | SLC36A4 | 11q21 | −0.69 | 8E-02 |
| 1560029_a_at | C11orf57 | 11q23 | −0.71 | 8E-02 |
| 232248_at | SIDT2 | 11q23 | −0.63 | 8E-02 |
| 219429_at | FA2H | 16q23 | −2.16 | 9E-02 |
| 1570119_at | PDS5B | 13q12 | −0.68 | 9E-02 |
| 225646_at | CTSC | 11q14 | −0.66 | 9E-02 |
| 202076_at | BIRC2 | 11q22 | −0.53 | 10E-02 |