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. 2004 Jan 1;32(Database issue):D383–D387. doi: 10.1093/nar/gkh001

Figure 2.

Figure 2

Flow of information in Rice PIPELINE. The top pathway shows the flow of gene structural information from the query. Users can obtain a GenBank report and a KOME report containing nucleic acid and amino acid analyses, domain search results and GO classification from Rice PIPELINE. They can also obtain information on cis-element motifs, phenotypes with flanking sequences, and expression profiles via the KOME report. The middle pathway shows the flow of gene expression information from the query. Users can obtain a GenBank report, a MAFF DNA Bank report, and an expression profile from Rice PIPELINE. Additionally, they can use genetic and physical map information on an INE link with RED. The bottom pathway shows the flow of genome information from BLAST results. Users can utilize map information, including genome sequences, from a PIPELINE search of the japonica genome. The map information of INE is directly linked with the GenBank report. Users can also obtain a GenBank report from the results of a PIPELINE search of the indica genome.