Table 2. Mapping of Active Literature-Derived Test Set Compounds into the Restrictive and the Partial Query Pharmacophore Models.
compd | IC50 [μM] | fit valuea restrictive model | fit value partial query model |
---|---|---|---|
10 | 5.1 | 0.00 | 0.00 |
11 | 0.06 | 1.56 | 3.53 |
12 | 2.6 | 0.00 | 1.50 |
13 | 0.9 | 0.00 | 1.60 |
14 | 0.06 | 0.00 | 2.32 |
15 | 3.9 | 0.00 | 1.67 |
16 | 0.007 | 4.06 | 4.26 |
17 | 1.7 | 0.00 | 3.23 |
18 | 0.07 | 0.00 | 2.05 |
19 | 1.3 | 0.00 | 2.89 |
The fit value is a quantitative metric, that indicates how well the chemical functions of the ligand geometrically map the features of the pharmacophore model. The maximum fit value for the reported models was 6 (each feature had a weight of 1).