Table 1. Summary of a query on three members of the Bacillus family: ORFans in each genome and orthologous ORFans.
Genome | ORFsa | Singleton ORFansb | Paralogous ORFan families (ORFs)c | Orthologous ORFan families (ORFs)d |
---|---|---|---|---|
Bacillus subtilis | 4100 | 494 | 24 (53) | |
Bacillus halodurans | 4066 | 494 | 13 (34) | |
Oceanobacillus iheyensis | 3496 | 333 | 8 (16) | |
B.subtilis–B.halodurans | 46 (94) | |||
B.subtilis–O.iheyensis | 27 (56) | |||
B.halodurans–O.iheyensis | 29 (58) | |||
All three genomes | 51 (175) |
ORFans in the Bacillus family of closely related organisms. The numbers of singleton, paralogous and orthologous ORFans is shown. Numbers of singleton and paralogous ORFans are listed for each individual genome; numbers of orthologous ORFans are listed for groups of at least two organisms. The number of paralogous and orthologous families is listed, and the total number of ORFs in each type of ORFan family appears in parenthesis. All numbers correspond to the 84-genome version of the database. An electronic version of the table in an extended form can be found at the ORFanage main page, under ‘NAR supplementary material’.
aNumber of ORFs in the genome.
bNumber of singleton ORFans in the genome.
cNumber of paralogous ORFan families; in parenthesis: the total number of ORFs in these families.
dNumber of orthologous ORFan families; in parenthesis: the total number of ORFs in these families.