Table 2.
Transposable Elements (TEs) discovered in the present study
| Intron Fragments | Species | Transposable Elements (TEs) | |||||
|---|---|---|---|---|---|---|---|
| Species-specific | Orthologous | ||||||
| TEs | Class | Length(bp) | TEs | Class | Length(bp) | ||
| Cidea1 | Martes penanti | SINEC_b2 | SINE/tRNA-Lys | 192 | L1_Canid_ | LINE/L1 | 54-82 |
| Mephitis mephitis | SINEC_b1 | SINE/tRNA-Lys | 188 | ||||
| Meles meles | SINEC_b1 | SINE/tRNA-Lys | 194 | ||||
| Arctonyx collaris | SINEC_b2 | SINE/tRNA-Lys | 194 | ||||
| Coro1c-4 | Tigger12c | DNA/TcMar-Tigger | 56-59 | ||||
| MIRb | SINE/MIR | 93-112 | |||||
| Coro1c-5 | Lutra lutra | SINEC_b1 | SINE/tRNA-Lys | 187 | SINEC_old | SINE/tRNA-Lys | 104-107 |
| L1ME4a | LINE/L1 | 65-67 | |||||
| Guca1b-3 | MIR | SINE/MIR | 58-63 | ||||
| Ociad1-4 | Mephitis mephitis | SINEC_b2 | SINE/tRNA-Lys | 268 | MIRc | SINE/MIR | 92-122 |
| Martes flavigula/Martes zibellina/Gulo gulo/Martes foina/Martes amaricana/Martes penanti | SINEC_b1 | SINE/tRNA-Lys | 175-187 | ||||
| Plod2-14 | Raccoon/Kinkajou | SINEC_b1 | SINE/tRNA-Lys | 192-195 | Kanga1a | DNA/TcMar-Tc2 | 129-188 |
| Kanga1c | DNA/TcMar-Tc2 | 81-92 | |||||
| Ssr1-5 | Ailurus fulgens | SINEC_b1 | SINE/tRNA-Lys | 196 | |||
| Tbc1d7-6 | MIR | SINE/MIR | 134-195 | ||||
| Tinagl1-1 | Mephitis mephitis/Ailurus fulgens | MIR3 | SINE/MIR | 72-76 | MIR | SINE/MIR | 49-64 |
| Tinagl1-3 | MIR | SINE/MIR | 85-87 | ||||
| Wasf1-3 | L2c | LINE/L2 | 85-90 | ||||
| Wasf1-6 | MER58A | DNA/hAT-Charlie | 197 | ||||
| Fgb-4 | Taxidea taxus | SINEC_b1 | SINE/tRNA-Lys | 199 | |||
| Lutra lutra | SINEC_b2 | SINE/tRNA-Lys | 187 | ||||
| Fgb-7 | Mephitis mephitis | SINEC_b1 | SINE/tRNA-Lys | 193 | MIRb | SINE/MIR | 196-198 |
| Mephitis mephitis | SINEC_b2 | SINE/tRNA-Lys | 193 | ||||
| Ttr-1 | SINEC_b1 | SINE/tRNA-Lys | 166-193 | ||||