Table 2. Top Results of Haplotype Associations with ASD in 2-, 3-, and 4-Marker Sliding Windows.
Gene | Markers | Allele(s)* | Freq* | PIndividual* | PGlobal |
---|---|---|---|---|---|
GAD1 | rs2241164-rs10191129 | G-G | 0.335 | 0.0086 | 0.0314 |
rs769407-rs7561581-rs4668331 | C-A-A | 0.696 | 0.0125 | 0.0233 | |
rs10191129-rs769407-rs7561581-rs4668331 | G-G-G-T | 0.251 | 0.0157 | 0.0520 | |
DLX1/2 | rs788160-rs1047889 | T-T | 0.187 | 0.3084 | 0.0059 |
rs788160-rs1047889-rs813720 | T-T-G | 0.181 | 0.1217 | 0.0250 | |
rs788160-rs1047889-rs813720-rs10186317 | T-T-G-A | 0.182 | 0.1304 | 0.6619 | |
DLX3/4 | rs11654766-rs16948563 | G-C | 0.140 | 0.0605 | 0.3005 |
rs11654766-rs16948563-rs11871663 | G-C-T | 0.109 | 0.0201 | 0.1874 | |
rs12453270-rs985626-rs919089-rs1058564 | A-C-A-C | 0.536 | 0.1187 | 0.1571 | |
DLX5/6 | rs1207733-rs9769385 | C-C | 0.901 | 0.0088 | 0.0301 |
rs1207731-rs1207733-rs9769385 | T-C-C | 0.716 | 0.0136 | 0.0360 | |
rs1207735-rs6960249-rs1207739-rs17600042 | G-A-C-C | 0.216 | 0.0511 | 0.0304 |
The allele combination, frequency, and p-value of the individual haplotype that yields the smallest p-value in the specific n-marker sliding window of the gene.