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. 2011 Jan 13;5(2):145–156. doi: 10.1007/s12079-010-0113-z

Table 1.

Primers for EBV multiplex PCR

Target gene Sequence Length Location in genomic gene References
BNRF1 Sense 5′-GGAACCTGGTCATCCTTGC-3′ 74 bp 4733–4753 (Niesters et al. 2000)
Anti-sense 5′-ACGTGCATGGACCGGTTAAT-3′ 4695–4679
EBNA2 Sense 5′-CCAGAGGTAAGTGGACTT-3′ 124 bp 14614–1463 (Saito et al. 1989)
Anti-sense 5′-GACCGGTGCCTTCTTAGG-3′ 14735–14718
EBNA1 Sense 5′-GTCATCATCATCCGGGTCTC-3′ 220 bp 96822–96841 (Telenti et al. 1990)
Anti-sense 5′-TTCGGGTTGGAACCTCCTTG-3′ 97091–97072
LMP1 Sense 5′-GACATGGTAATGCCTAGAAG-3′ 259 bp 168130–168149 (Midgley et al. 2003)
Anti-sense 5′-GCGACTCTGCTGGAAATGAT-3′ 168389–16
BMLF Sense 5′-CACCACCTTGTTTTGACGGG-3′ 304 bp 83037–83056 (Pedneault and Katz 1993)
Anti-sense 5′-GTCAACCAACAAGGACACAT-3′ 83340−83321
EBNA3C Sense 5′-CAATCGCACCTGCAAGCGCTA-3′ 518 bp 100362–100383 (Midgley et al. 2003)
Anti-sense 5′-GACACCCATGAAACGCACGAAATC-3′ 100806–100785
BZLF1 Sense 5′-ATTGCACCTTGCCGCCACCTTTG-3′ 608 bp 103194–103180 (Luo et al. 2005)
Anti-sense 5′-CGGCATTTTCTGGAAGCCACCCGA-3′ 102486–102463
ALAS1 Sense 5′-CTGGGGCAGGTGGTACTAGA-3′ 804 bp 1161–1180 Designed by Primer3 input0.4.0
Anti-sense 5′-TCATTGTGGCGGAAGATGTA-3′ 1417–1397 online software