TABLE 3.
Typical gene clusters containing HPr-like proteins in the phyla Firmicutes and Proteobacteriaa
| Phylum | Gene cluster containing:
|
||||
|---|---|---|---|---|---|
| HPr | NPr | Crh | SPr | XPrb | |
| Firmicutes | H-I, H | j-k-l-H | |||
| Proteobacteria | |||||
| α | H-I | N-h-IIA∥K′-(j)-IIA-H-(I) | |||
| β | (N)-(h)-IIA-K-j∥IIA-H-I | ||||
| γ | H-I-IIA | N-h-IIA-j-H | IIA-IIB-IIC-sk-H | N-h-(IIA)-K-j-IIA-H-I | |
| δ | N-h-K-j-IIA-H-I | ||||
SPr and XPr are defined in the text. Symbols used are as follows: H, HPr-like protein; N, σN transcription factor; I, PTS enzyme I; IIA, IIB, and IIC, PTS enzymes IIA, IIB, and IIC; K and K′, full-length and short-version HPrK/P homologues, respectively; j, k, l, and h, unknown conserved genes; sk, putative sugar kinase.
Subclusters left and right of ∥ are distantly located on the genomes. Parentheses indicate that the genes are not present in all species.