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. Author manuscript; available in PMC: 2012 May 6.
Published in final edited form as: J Proteome Res. 2011 Mar 28;10(5):2546–2554. doi: 10.1021/pr200016n

Table 1.

proteins with changed SILAC ratios after NT-3 stimulation

accession number protein name mean ratio (sti/control) known ?
IPI00324794 Isoform p66 of SHC-transforming protein 3 17.2 Yes
IPI00870679 phosphoinositide-3-kinase, class 2, beta polypeptide 13.8 Yes
IPI00210944 Isoform GP145-TrkB of BDNF/NT-3 growth factors receptor precursor 9.8 Yes
IPI00231029 Isoform TRKC of NT-3 growth factor receptor precursor 9.2 Yes
IPI00206172 Isoform 1 of Mitogen-activated protein kinase 3 6.8 Yes
IPI00119663 Mitogen-activated protein kinase 1 6.3 Yes
IPI00194572 SH2B adapter protein 2 4.4 Yes
IPI00364933 signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 4.0 Yes
IPI00212420 148 kDa protein 3.8 Yes
IPI00121215 Brain-derived neurotrophic factor precursor 3.6 Yes
IPI00206037 similar to Secretory carrier-associated membrane protein 3 3.4 No
IPI00119058 Isoform 1 of Growth factor receptor-bound protein 2 3.0 Yes
IPI00116554 Isoform 1 of Tyrosine-protein phosphatase non-receptor type 11 2.8 Yes
IPI00201027 Isoform 1 of Hepatocyte growth factor-regulated tyrosine kinase substrate 2.8 Yes
IPI00212552 fibroblast growth factor receptor substrate 2 2.5 Yes
IPI00194958 Isoform 2 of Phosphatidylinositol-binding clathrin assembly protein 2.5 Yes
IPI00763245 similar to Rho GTPase-activating protein 2.2 Yes
IPI00193983 Clathrin heavy chain 1 2.0 Yes
IPI00208759 syntaxin 12 2.0 Yes
IPI00194179 Secretory carrier-associated membrane protein 1 1.9 No
IPI00207305 Isoform Brain of Clathrin light chain A 1.8 Yes
IPI00466699 Isoform 3 of Glutamate receptor 2 precursor 1.8 Yes
IPI00128454 Isoform 2 of Seizure 6-like protein 2 precursor 1.7 No
IPI00204447 Vesicle associated membrane protein 2B 1.7 No
IPI00750889 Ubc protein 1.6 Yes
IPI00121131 Neuron-specific protein family member 1 1.6 No
IPI00364450 Nedd4 family interacting protein 2 1.5 No
IPI00212014 Transitional endoplasmic reticulum ATPase 0.7 No
IPI00331865 Isoform 2 of Drebrin-like protein 0.6 No
IPI00372478 NCK interacting protein with SH3 domain 0.6 No
IPI00326236 Hepatocyte growth factor receptor precursor 0.6 No