Figure 2.
Selection of different rotation potentials discussed in the text and definition of notation. All four potentials V (color coded) are shown for a single atom at position xj(t). (A) Isotropic potential Viso, (B) radial motion potential Vrm and flexible potential Vflex, (C,D) radial motion 2 potential Vrm2 and flexible 2 potential Vflex2 for ε′ = 0 nm2 (C) and ε′ = 0.01 nm2 (D). The rotation axis is perpendicular to the plane and marked by ⊗. The light gray contours indicate Boltzmann factors e−V/(kBT) in the xj plane for T = 300 K and k = 200 kJ/(mol·nm2). The green arrow shows the direction of the force Fj acting on atom j; the blue dashed line indicates the motion of the reference position.