Table 2.
Detailed description of genes and unassigned regions (UR) within the complete mt genome (15578 bp) of Dendropoma maximum
| Gene | Starta | End | Length | Amino acids | Start codon | End codonb | UR (%AT)c |
|---|---|---|---|---|---|---|---|
| cox1 | 1 | 1536 | 1536 | 512 | ATG | TAG | 38 (76.3) |
| trnD | 1575 | 1642 | 68 | - | - | - | 0 |
| atp8 | 1643 | 1798 | 156 | 52 | ATG | TAG | -7 |
| atp6 | 1792 | 2479 | 688 | 229 | ATG | T-- | 0 |
| trnN | 2480 | 2550 | 71 | - | - | - | 0 |
| nad5 | 2551 | 4251 | 1701 | 567 | ATG | TAA | 14 (78.6) |
| trnK | 4266 | 4340 | 75 | - | - | - | -2 |
| trnA | 4339 | 4404 | 66 | - | - | - | 1 |
| cox3 | 4406 | 5185 | 780 | 260 | ATG | TAA | 15 (86.7) |
| trnSAGN | 5201 | 5274 | 74 | - | - | - | 1 |
| nad2 | 5276 | 6295 | 1020 | 340 | ATG | TAG | 0 |
| trnR | 6296 | 6364 | 69 | - | - | - | 11 (54.5)/167 (69.3)d |
| rrnS* (pseudo) | 6376 | 6496 | 121 | - | - | - | 35 (74.3) |
| trnY* | 6532 | 6598 | 67 | - | - | - | 0 |
| trnM* | 6599 | 6668 | 70 | - | - | - | 2 |
| trnC* | 6671 | 6739 | 69 | - | - | - | 0 |
| trnW* | 6740 | 6807 | 68 | - | - | - | -4 |
| trnQ* | 6804 | 6874 | 71 | - | - | - | 0 |
| trnG* | 6875 | 6943 | 69 | - | - | - | 0 |
| trnE* | 6944 | 7016 | 73 | - | - | - | 0 |
| rrnS | 7017 | 8049 | 1033 | - | - | - | 0 |
| trnV | 8050 | 8116 | 67 | - | - | - | 0 |
| rrnL | 8117 | 9563 | 1447 | - | - | - | 0 |
| trnLUUR | 9564 | 9633 | 70 | - | - | - | -4 |
| trnLCUN | 9630 | 9698 | 69 | - | - | - | 1 |
| nad1 | 9700 | 10632 | 933 | 311 | ATG | TAA | 2 |
| trnP | 10635 | 10707 | 73 | - | - | - | 1 |
| nad6 | 10709 | 11189 | 481 | 160 | ATG | T-- | 0 |
| cob | 11190 | 12329 | 1140 | 380 | ATG | TAG | 2 |
| trnSUCN | 12332 | 12399 | 68 | - | - | - | 33 (54.5) |
| trnT* | 12433 | 12508 | 76 | - | - | - | 8 |
| nad4L | 12517 | 12810 | 294 | 98 | ATG | TAG | -7 |
| nad4 | 12804 | 14161 | 1358 | 452 | GTG | TA- | 0 |
| trnH | 14162 | 14231 | 70 | - | - | - | 46 (47.8) |
| trnF | 14278 | 14346 | 69 | - | - | - | 0 |
| trnI | 14347 | 14418 | 72 | - | - | - | 2 |
| nad3 | 14421 | 14774 | 354 | 118 | ATG | TAG | 46 (65.2) |
| cox2 | 14821 | 15498 | 678 | 226 | ATG | TAG | 80 (63.8) |
a Genes are arranged relative to cox1. Those encoded on the "-" strand are indicated with an asterisk (*).
b T, and TA, refer to instances where incomplete stop codons are inferred.
c Unassigned regions are identified by positive values. Negative values indicate overlap between adjacent genes. Values in brackets refer to %AT of the associated UR (only those UR >10 bp in length were analyzed).
d For the unassigned region between trnR and trnY spanning the pseudogene rrnS.