Table 3.
Detailed description of genes and unassigned regions (UR) within the complete mt genome (15641 bp) of Dendropoma gregarium
| Gene | Starta | End | Length | Amino acids | Start codon | End codonb | UR (%AT)c |
|---|---|---|---|---|---|---|---|
| cox1 | 1 | 1533 | 1533 | 511 | ATG | TAG | 3 |
| trnD | 1537 | 1611 | 75 | - | - | - | 2 |
| atp8 | 1614 | 1769 | 156 | 52 | ATG | TAA | -7 |
| atp6 | 1763 | 2452 | 690 | 230 | ATG | TAA | 7 |
| trnN | 2460 | 2535 | 76 | - | - | - | 2 |
| nad5 | 2538 | 4259 | 1722 | 574 | ATA | TAA | 27 (74.1) |
| trnA | 4287 | 4354 | 68 | - | - | - | 1 |
| cox3 | 4356 | 5134 | 779 | 260 | ATG | TA- | 0 |
| trnSAGN | 5135 | 5201 | 67 | - | - | - | 38 (60.5) |
| nad2 | 5240 | 6252 | 1013 | 338 | ATG | TA- | 0 |
| trnR | 6253 | 6321 | 69 | - | - | - | 55 (72.7) |
| trnY* | 6377 | 6443 | 67 | - | - | - | 1 |
| trnM* | 6445 | 6514 | 70 | - | - | - | 10 (30.0) |
| trnC* | 6525 | 6597 | 73 | - | - | - | 1 |
| trnW* | 6599 | 6667 | 69 | - | - | - | 11 (50.0) |
| trnQ* | 6679 | 6735 | 57 | - | - | - | -3 |
| trnG* | 6733 | 6798 | 66 | - | - | - | 2 |
| trnE* | 6801 | 6872 | 72 | - | - | - | 0 |
| rrnS | 6873 | 7851 | 979 | - | - | - | 0 |
| trnV | 7852 | 7922 | 71 | - | - | - | 16 (50.0) |
| trnK1 | 7939 | 8013 | 75 | - | - | - | 55 (65.5) |
| trnP | 8069 | 8139 | 71 | - | - | - | 1 |
| nad6 | 8141 | 8629 | 489 | 163 | ATG | TAG | 0 |
| rrnL | 8630 | 9978 | 1349 | - | - | - | 0 |
| trnLUUR | 9979 | 10049 | 71 | - | - | - | -2 |
| trnLCUN | 10048 | 10116 | 69 | - | - | - | 2 |
| nad1 | 10119 | 11049 | 931 | 310 | ATG | T-- | 125 (52.8) |
| cob | 11175 | 12323 | 1149 | 383 | ATG | TAA | 13 (84.6) |
| trnSUCN | 12337 | 12407 | 71 | - | - | - | 4 |
| tRNA T* | 12412 | 12479 | 68 | - | - | - | 7 |
| nad4L | 12487 | 12780 | 294 | 98 | ATG | TAA | -7 |
| nad4 | 12774 | 14129 | 1356 | 452 | ATG | TAG | 30 (66.7) |
| trnH | 14160 | 14227 | 68 | - | - | - | 0 |
| trnF | 14228 | 14296 | 69 | - | - | - | 6 |
| trnI | 14303 | 14375 | 73 | - | - | - | 137 (58.4) |
| trnK2 | 14513 | 14586 | 74 | - | - | - | 2 |
| nad3 | 14589 | 14939 | 351 | 117 | ATG | TAG | 7 |
| cox2 | 14947 | 15636 | 690 | 230 | ATG | TAG | 5 |
a Genes are arranged relative to cox1. Those encoded on the "-" strand are indicated with an asterisk (*).
b T, and TA, refer to instances where incomplete stop codons are inferred.
c Unassigned regions are identified by positive values. Negative values indicate overlap between adjacent genes. Values in brackets refer to %AT of the associated UR (only those UR >10 bp in length were analyzed).