Table 3.
Comparison between Mytibase and DeepSeaVent database
| DeepSeaVent and Mytibase comparison | ||||
|---|---|---|---|---|
| E-value | Bit-score | Matched proteins with InterPro annotation | ||
| 10-5 | 90 | 5,261 | ||
| 10-5 | 120 | 4,120 | ||
| 10-5 | 200 | 1,923 | ||
|
Biological Process GO:0008150 |
DeepSeaVent |
DeepSeaVent vs Mytibase |
Shared percentage | |
| Cell killing | 12 | 6 | 50.0 | |
| Immune system process | 56 | 3 | 5.4 | |
| Death | 14 | 2 | 14.3 | |
| Multicellular organismal process | 39 | 6 | 15.4 | |
| Cellular component biogenesis | 318 | 175 | 55.0 | |
| Cell wall organization or biogenesis | 9 | 1 | 11.1 | |
|
Cellular Component GO:0005575 |
||||
| Virion | 63 | 1 | 1.6 | |
| Macromolecular complex | 1495 | 798 | 53.4 | |
| Virion part | 63 | 1 | 1.6 | |
|
Molecular Function GO:0003674 |
||||
| Structural molecule activity | 942 | 533 | 56.6 | |
| Transporter activity | 570 | 101 | 17.7 | |
| Electron carrier activity | 350 | 54 | 15.4 | |
| Enzyme regulator activity | 161 | 22 | 13.7 | |
| Molecular transducer activity | 110 | 6 | 5.5 | |
The fixed E-value 10-5 was kept for three different bit-scores (90,120 and 200). The number of contigs with GO ontology assignments shared between both databases is shown together with respective shared percentage