Table 4.
Relative expression results from REST analysis of qPCR data
| No. | Gene | Type | Reaction Efficiency | Expression | Std. Error | P(H1)* |
|---|---|---|---|---|---|---|
| glyA | Reference | 0.91 | 1.33 | |||
| pykA | Reference | 0.99 | 1.00 | |||
| tpiA | Reference | 0.99 | 0.75 | |||
| 1 | exbB1 | Sample | 1.00 | 13.94 | 4.26 - 35.88 | 0.000 |
| 2 | APL_1953 | Sample | 0.99 | 6.82 | 2.45 - 20.84 | 0.000 |
| 3 | APL_1954 | Sample | 0.98 | 5.09 | 1.49 - 16.29 | 0.000 |
| 4 | APL_1955 | Sample | 1.00 | 6.68 | 2.44 - 20.64 | 0.000 |
| 5 | cirA | Sample | 0.85 | 2.26 | 0.92 - 5.30 | 0.001 |
| 6 | ywbN | Sample | 1.00 | 3.76 | 1.87 - 7.70 | 0.000 |
| 7 | copA | Sample | 1.00 | 6.98 | 2.79 - 17.86 | 0.000 |
| 8 | hlyX | Sample | 0.95 | 1.78 | 0.70 - 5.14 | 0.017 |
| 9 | tbpA1 | Sample | 0.90 | 7.82 | 2.62 - 18.50 | 0.000 |
| 10 | tonB1 | Sample | 0.94 | 12.60 | 3.56 - 34.29 | 0.000 |
| 11 | tonB2 | Sample | 1.00 | 1.65 | 0.75 - 3.66 | 0.012 |
| 12 | lldD | Sample | 0.98 | 15.32 | 1.69 - 90.73 | 0.000 |
| 13 | napB | Sample | 0.94 | 0.18 | 0.07 - 0.58 | 0.000 |
| 14 | nqrC | Sample | 0.93 | 0.36 | 0.18 - 0.74 | 0.000 |
| 15 | ykgE | Sample | 0.89 | 0.12 | 0.04 - 0.45 | 0.000 |
| 16 | hyaA | Sample | 1.00 | 0.05 | 0.02 - 0.21 | 0.000 |
| 17 | fdxG | Sample | 1.00 | 0.30 | 0.07 - 1.37 | 0.004 |
| 18 | hybB | Sample | 0.93 | 0.09 | 0.03 - 0.37 | 0.000 |
*The hypothesis test represents the probability of the alternative hypothesis that the difference between the sample and control groups is due only to chance. Results are based on 6000 randomizations.