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. Author manuscript; available in PMC: 2011 May 11.
Published in final edited form as: Ann Appl Stat. 2010 Dec 1;4(4):1749–1773. doi: 10.1214/10-AOAS357

Table 10.

Overlap of CNVs detected by PennCNV, Fused Lasso and DPI. The percentages listed in parentheses refer to the ratio of the number of overlapping CNVs to the total number of unique CNVs detected. For patient 1 DPI treated a large duplication region on the long arm of Chromosome 22 as two segments. Thus, the number of overlapping CNVs was increased by 1 compared to PennCNV vs Fused Lasso

Patient PennCNV vs Fused Lasso PennCNV vs DPI Fused Lasso vs DPI 3 methods
1 7 (15.6%) 12 (31.6%) 9 (36.0%) 8 (16.7%)
2 7 (38.9%) 6 (46.2%) 7 (53.8%) 6 (33.3%)
3 10 (43.5%) 15 (57.7%) 8 (28.6%) 8 (26.7%)
4 8 (8.2%) 13 (14.4%) 8 (26.7%) 7 (6.9%)