Table 5.
Similality search results of probes of target seqeunces in module 243 against protein data sets of Brachypodium, rice, Arabidopsis and transcript sequence data sets of wheat and barley
| Probe name | Annotation from NetAffx | TAGI | HVGI |
|---|---|---|---|
| Contig12010_at | BAA93584.1 .040 (AB038621) ORF3 [TT virus] | CA616952 4e-17 | TC231445 6e-165 |
| Contig16756_at | TC452975 7e-17 | TC223861 0.0 | |
| Contig20688_at | TC232361 6e-115 | ||
| Contig24192_at | TC224488 0.0 | ||
| Contig25639_at | TC234474 4e-100 | ||
| Contig25664_at | TC229565 3e-179 | ||
| Contig26352_at | TC225671 0.0 | ||
| Contig8098_at | TC230464 3e-114 | ||
| EBem07_SQ004_I01_at | BM369750 5e-178 | ||
| EBma08_SQ002_F06_at | BE422961 2e-13 | BM371330 0.0 | |
| HB01M09r_at | TC203396 0.0 | ||
| HB04I10r_x_at | BU967505 3e-53 | ||
| HD02I19r_at | BQ462026 5e-106 | ||
| HD04G09u_at | AAM94290.1 9e-05 (AF527807) putative TNP-like transposable element [Sorghum bicolor] | TC446423 1e-18 | BQ658594 0.0 |
| HD08L09r_at | TC210581 0.0 | ||
| HF07C04r_at | TC236704 4e-75 | ||
| HF09N12r_at | TC417890 1e-30 | TC208251 2e-67 | |
| HF13L09r_at | TC417890 2e-25 | TC235158 2e-143 | |
| HM05O11r_at | TC234268 3e-82 | ||
| HM07G04r_at | TC218602 0.0 | ||
| HM11M18r_at | TC210566 9e-23 | ||
| HM11P04r_at | TC222706 0.0 | ||
| HT10B20u_at | AJ602722 2e-14 | CA010503 0.0 | |
| HZ01M13u_at | BQ665987 6e-175 |
TAGI, TIGR Gene Index of wheat searched by BLASTN with a threshold of e-value <1e-10.
HVGI, TIGR Gene Index of barley searched by BLASTN with a threshold of e-value <1e-10.