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. Author manuscript; available in PMC: 2011 May 16.
Published in final edited form as: Cancer Biol Ther. 2010 Jun 18;9(12):1017–1024. doi: 10.4161/cbt.9.12.11804

Table 2. Methylation levels in subtypes of invasive breast carcinoma.

Methylation level (mean ± SD, median)

Gene Basal-like (n = 33) Luminal (n = 57) HER2 (n = 24) p value*

TWIST 9.1 ± 20.0, 0.19 30.4 ± 35.5, 11.64 20.7 ± 27.6, 9.37 0.002

RASSF1A 15.0 ± 22.3, 1.59 38.0 ± 27.7, 40.01 23.0 ± 21.4, 13.87 <0.0001

HIN-1 12.8 ± 28.5, 0.01 38.9 ± 43.4, 6.59 37.7 ± 37.5, 32.18 0.004

APC1 18.9 ± 32.2, 0.30 31.9 ± 38.4, 1.25 45.9 ± 35.1, 55.87 0.023

CDH1 1.7 ± 4.4, 0.01 0.5 ± 1.7, 0.00 2.4 ± 3.6, 0.52 0.0002

BRCA1 21.1 ± 35.5, 0.00 0.8 ± 3.9, 0.00 0.9 ± 4.4, 0.00 0.005

RAR-β 10.7 ± 18.1, 4.38 12.2 ± 20.9, 1.49 14.9 ± 16.1, 10.94 0.098

CYCLIN D2 10.5 ± 24.9, 0.00 18.2 ± 30.1, 0.48 13.7 ± 24.0, 0.26 0.223

ESR1 0.2 ± 0.9, 0.00 0.7 ± 2.9, 0.00 2.2 ± 9.5, 0.00 0.641
*

p value obtained using the nonparametric Kruskal-Wallis test.