Table 2. Methylation levels in subtypes of invasive breast carcinoma.
Methylation level (mean ± SD, median) | ||||
---|---|---|---|---|
Gene | Basal-like (n = 33) | Luminal (n = 57) | HER2 (n = 24) | p value* |
TWIST | 9.1 ± 20.0, 0.19 | 30.4 ± 35.5, 11.64 | 20.7 ± 27.6, 9.37 | 0.002 |
| ||||
RASSF1A | 15.0 ± 22.3, 1.59 | 38.0 ± 27.7, 40.01 | 23.0 ± 21.4, 13.87 | <0.0001 |
| ||||
HIN-1 | 12.8 ± 28.5, 0.01 | 38.9 ± 43.4, 6.59 | 37.7 ± 37.5, 32.18 | 0.004 |
| ||||
APC1 | 18.9 ± 32.2, 0.30 | 31.9 ± 38.4, 1.25 | 45.9 ± 35.1, 55.87 | 0.023 |
| ||||
CDH1 | 1.7 ± 4.4, 0.01 | 0.5 ± 1.7, 0.00 | 2.4 ± 3.6, 0.52 | 0.0002 |
| ||||
BRCA1 | 21.1 ± 35.5, 0.00 | 0.8 ± 3.9, 0.00 | 0.9 ± 4.4, 0.00 | 0.005 |
| ||||
RAR-β | 10.7 ± 18.1, 4.38 | 12.2 ± 20.9, 1.49 | 14.9 ± 16.1, 10.94 | 0.098 |
| ||||
CYCLIN D2 | 10.5 ± 24.9, 0.00 | 18.2 ± 30.1, 0.48 | 13.7 ± 24.0, 0.26 | 0.223 |
| ||||
ESR1 | 0.2 ± 0.9, 0.00 | 0.7 ± 2.9, 0.00 | 2.2 ± 9.5, 0.00 | 0.641 |
p value obtained using the nonparametric Kruskal-Wallis test.