. Author manuscript; available in PMC: 2011 May 16.

Published in final edited form as: Acta Neuropathol. 2010 Nov 23;121(3):373–380. doi: 10.1007/s00401-010-0782-y

Table 2.

TMEM106B SNP frequencies among ALS cases (n = 85) and neurologically normal controls (n = 553)

SNP ID	Locus	Genotypes controls (n = 553)	Genotypes ALS (n = 85)	p value	MAF controls (n = 553)	MAF ALS (n = 85)	p value
rs1020004	12222303	AA 258 (47)	AA 38 (45)	n/s	0.307	0.312	n/s
		AG 249 (45)	AG 41 (48)
		GG 45 (8)	GG 6 (7)
rs1990622	12250312	TT 190 (34)	TT 27 (32)	n/s	0.41	0.418	n/s
		TC 272 (49)	TC 45 (53)
		CC 91 (16)	CC 13 (15)

SNPs are listed in genomic order based on location on chromosome 7 (Locus within Genome Build 36). For genotypes, absolute number is shown, with percentage in parentheses. One genotyping reaction failed for the rs1020004 controls, so only 552 individuals were successfully genotyped

MAF minor allele frequency, n/s non-significant