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. 2010 Nov 30;10:265. doi: 10.1186/1471-2229-10-265

Table 1.

List of analyzed Eleocharis species and measured values

2C [pg] 2n1) 2C/2n [Mbp] LTR retrotransposon densities (real-time PCR) LTR retrotransposon densities (dot blot)

Ty1-copia Ty3-gypsy Helos1 Ty1-copia Ty3-gypsy Helos1
E. acicularis 2.472) 20 121 1507 158 4 36671 1859 686
E. austriaca 4.84 16 296 4290 101 622 n.a. n.a. n.a.
E. carniolica 2.58 20 126 1971 159 133 29843 2064 801
E. cellulosa 0.84 n.a. n.a. 1236 193 10 9875 918 300
E. eryhtropoda 5.48 18 298 n.a. n.a. n.a. n.a. n.a. n.a.
E. interstincta n.a. 40/52 n.a. n.a. n.a. n.a. n.a. n.a. n.a.
E. macrostachya 9.80 38 253 2217 119 181 n.a. n.a. n.a.
E. mamillata 4.60 16 282 3928 89 677 85510 1279 7186
E. ovata 1.40 10 137 1007 174 19 35417 1517 816
E. palustris 4.20 16 257 3464 113 435 79966 1445 8132
E. quinqueflora 1.12 136 8 1112 241 2 n.a. n.a. n.a.
E. sterneri 18.00 74 238 2217 107 199 n.a. n.a. n.a.
E. uniglumis 10.20 46 217 3899 149 320 81196 2845 5634
E. vigens 8.74 36 238 2507 111 243 n.a. n.a. n.a.
E. waltersii 11.00 39 276 3319 131 386 70679 900 6735
E. xyridiformis 5.50 18 299 2739 183 291 92801 1792 6676
 Significance of phylogenetic signal - * ** * * ** ** - **

1) Chromosome numbers were taken from previous studies ([68]: E. palustris, E. waltersii; [49]: E. sterneri because of sample identity; [69]: E. quinqueflora because of population identity; [35]: E. interstincta). For the remaining samples, chromosome numbers were counted by O. Rotreklová and P. Bureš (unpublished data).

2) An average of seven samples, each representing a different population (see Results and Discussion).

* p < 0.05; ** p < 0.01